Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC027702.1-201ENST00000563810 1770 ntBASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 LINC01006-201ENST00000333319 2292 ntBASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 AC007322.3-201ENST00000426526 701 ntBASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 AC007322.4-201ENST00000509611 723 ntBASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 AL591742.1-201ENST00000604433 565 ntBASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.16■□□□□ 0.66
SIMC1Q8NDZ2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIMC1Q8NDZ2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIMC1Q8NDZ2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 AC007322.1-201ENST00000426983 750 ntBASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIMC1Q8NDZ2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 AL050303.2-201ENST00000619798 666 ntBASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SIMC1Q8NDZ2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 CYP2T1P-201ENST00000432607 1285 ntBASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 CROCCP5-201ENST00000436658 830 ntBASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 AC231657.2-201ENST00000624556 255 ntBASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.12■□□□□ 0.65
SIMC1Q8NDZ2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms