Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO39Q8N4B4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 MIPEPP3-201ENST00000412105 444 ntBASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO39Q8N4B4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 SLC25A24-204ENST00000569674 2357 ntBASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 AC007322.4-201ENST00000509611 723 ntBASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 AC120498.10-201ENST00000621827 505 ntBASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO39Q8N4B4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 AC092667.1-201ENST00000434301 2586 ntBASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 RNA5SP413-201ENST00000516373 109 ntBASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 OR10C1-204ENST00000622521 1039 ntBASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 AC073314.1-201ENST00000568729 2216 ntBASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO39Q8N4B4 GABARAPL3-202ENST00000624044 1851 ntBASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 AP005212.1-201ENST00000581547 1997 ntBASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 AC007225.1-201ENST00000566331 1836 ntBASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 POU5F1P3-201ENST00000428824 1078 ntBASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 AC069236.1-201ENST00000604339 616 ntBASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO39Q8N4B4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FBXO39Q8N4B4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FBXO39Q8N4B4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
FBXO39Q8N4B4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
FBXO39Q8N4B4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.27■□□□□ 0.83
FBXO39Q8N4B4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms