Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 TCF3P1-201ENST00000423021 1937 ntBASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CPNE8Q86YQ8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 KRT8P36-201ENST00000489121 1440 ntBASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE8Q86YQ8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 AC016405.3-201ENST00000607710 860 ntBASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.33■■□□□ 1.01
CPNE8Q86YQ8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPNE8Q86YQ8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPNE8Q86YQ8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE8Q86YQ8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE8Q86YQ8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE8Q86YQ8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE8Q86YQ8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 AC011767.1-201ENST00000617410 1153 ntBASIC21.32■■□□□ 1
CPNE8Q86YQ8 AC010536.3-201ENST00000620306 533 ntBASIC21.32■■□□□ 1
CPNE8Q86YQ8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE8Q86YQ8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE8Q86YQ8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE8Q86YQ8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
CPNE8Q86YQ8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.31■■□□□ 1
CPNE8Q86YQ8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE8Q86YQ8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE8Q86YQ8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CPNE8Q86YQ8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms