Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC10.95□□□□□ -0.66
LCA10Q71F78 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 AC116562.4-201ENST00000641316 2276 ntBASIC10.95□□□□□ -0.66
LCA10Q71F78 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LCA10Q71F78 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 ATP5G2P3-201ENST00000429083 425 ntBASIC10.95□□□□□ -0.66
LCA10Q71F78 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC10.95□□□□□ -0.66
LCA10Q71F78 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC10.95□□□□□ -0.66
LCA10Q71F78 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LCA10Q71F78 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC10.95□□□□□ -0.66
LCA10Q71F78 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
LCA10Q71F78 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LCA10Q71F78 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
LCA10Q71F78 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC10.95□□□□□ -0.66
LCA10Q71F78 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LCA10Q71F78 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.95□□□□□ -0.66
LCA10Q71F78 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LCA10Q71F78 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC10.94□□□□□ -0.66
LCA10Q71F78 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LCA10Q71F78 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC10.94□□□□□ -0.66
LCA10Q71F78 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LCA10Q71F78 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC10.94□□□□□ -0.66
LCA10Q71F78 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC10.94□□□□□ -0.66
LCA10Q71F78 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.94□□□□□ -0.66
LCA10Q71F78 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LCA10Q71F78 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC10.94□□□□□ -0.66
LCA10Q71F78 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC10.94□□□□□ -0.66
LCA10Q71F78 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.94□□□□□ -0.66
LCA10Q71F78 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LCA10Q71F78 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
LCA10Q71F78 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LCA10Q71F78 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LCA10Q71F78 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC10.93□□□□□ -0.66
LCA10Q71F78 REST-206ENST00000612429 1376 ntTSL 5 BASIC10.93□□□□□ -0.66
LCA10Q71F78 REST-207ENST00000616975 1370 ntTSL 5 BASIC10.93□□□□□ -0.66
LCA10Q71F78 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LCA10Q71F78 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC10.93□□□□□ -0.66
LCA10Q71F78 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LCA10Q71F78 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC10.93□□□□□ -0.66
LCA10Q71F78 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.93□□□□□ -0.66
LCA10Q71F78 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC10.93□□□□□ -0.66
LCA10Q71F78 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC10.93□□□□□ -0.66
LCA10Q71F78 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LCA10Q71F78 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms