Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
CAV3P56539 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAV3P56539 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CAV3P56539 AC125437.2-201ENST00000625180 2167 ntBASIC18.1■□□□□ 0.49
CAV3P56539 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAV3P56539 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CAV3P56539 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CAV3P56539 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CAV3P56539 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
CAV3P56539 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CAV3P56539 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.09■□□□□ 0.49
CAV3P56539 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.09■□□□□ 0.49
CAV3P56539 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.09■□□□□ 0.49
CAV3P56539 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.09■□□□□ 0.49
CAV3P56539 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CAV3P56539 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CAV3P56539 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CAV3P56539 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAV3P56539 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAV3P56539 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAV3P56539 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CAV3P56539 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CAV3P56539 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.08■□□□□ 0.49
CAV3P56539 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAV3P56539 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.08■□□□□ 0.48
CAV3P56539 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.08■□□□□ 0.48
CAV3P56539 AC004408.2-201ENST00000623613 2777 ntBASIC18.08■□□□□ 0.48
CAV3P56539 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CAV3P56539 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.08■□□□□ 0.48
CAV3P56539 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAV3P56539 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.08■□□□□ 0.48
CAV3P56539 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CAV3P56539 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.07■□□□□ 0.48
CAV3P56539 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
CAV3P56539 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.07■□□□□ 0.48
CAV3P56539 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CAV3P56539 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.07■□□□□ 0.48
CAV3P56539 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.07■□□□□ 0.48
CAV3P56539 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.07■□□□□ 0.48
CAV3P56539 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CAV3P56539 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.07■□□□□ 0.48
CAV3P56539 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAV3P56539 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.07■□□□□ 0.48
CAV3P56539 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CAV3P56539 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.06■□□□□ 0.48
CAV3P56539 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.06■□□□□ 0.48
CAV3P56539 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.06■□□□□ 0.48
CAV3P56539 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.06■□□□□ 0.48
CAV3P56539 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAV3P56539 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAV3P56539 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms