Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CLCN4P51793 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCN4P51793 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCN4P51793 KRT17P2-201ENST00000300992 1314 ntBASIC21.54■■□□□ 1.04
CLCN4P51793 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCN4P51793 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.53■■□□□ 1.04
CLCN4P51793 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 KRASP1-201ENST00000407852 552 ntBASIC21.53■■□□□ 1.04
CLCN4P51793 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCN4P51793 AL390719.1-204ENST00000412397 1219 ntBASIC21.53■■□□□ 1.04
CLCN4P51793 FAM210CP-201ENST00000445714 574 ntBASIC21.53■■□□□ 1.04
CLCN4P51793 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCN4P51793 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.53■■□□□ 1.04
CLCN4P51793 LINC01023-201ENST00000606054 436 ntBASIC21.53■■□□□ 1.04
CLCN4P51793 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCN4P51793 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CLCN4P51793 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN4P51793 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCN4P51793 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.52■■□□□ 1.04
CLCN4P51793 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CLCN4P51793 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
CLCN4P51793 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.52■■□□□ 1.04
CLCN4P51793 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCN4P51793 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CLCN4P51793 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 AP001412.1-201ENST00000608405 714 ntBASIC21.52■■□□□ 1.04
CLCN4P51793 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN4P51793 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.52■■□□□ 1.04
CLCN4P51793 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLCN4P51793 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CLCN4P51793 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLCN4P51793 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CLCN4P51793 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CLCN4P51793 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.51■■□□□ 1.03
CLCN4P51793 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.51■■□□□ 1.03
CLCN4P51793 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.51■■□□□ 1.03
CLCN4P51793 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CLCN4P51793 AL135905.2-201ENST00000584934 1404 ntBASIC21.51■■□□□ 1.03
CLCN4P51793 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.51■■□□□ 1.03
CLCN4P51793 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.51■■□□□ 1.03
CLCN4P51793 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
CLCN4P51793 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN4P51793 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CLCN4P51793 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCN4P51793 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CLCN4P51793 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CLCN4P51793 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.5■■□□□ 1.03
CLCN4P51793 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.5■■□□□ 1.03
CLCN4P51793 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.5■■□□□ 1.03
CLCN4P51793 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.5■■□□□ 1.03
CLCN4P51793 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.5■■□□□ 1.03
CLCN4P51793 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.5■■□□□ 1.03
CLCN4P51793 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCN4P51793 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CLCN4P51793 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN4P51793 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CLCN4P51793 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.49■■□□□ 1.03
CLCN4P51793 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CLCN4P51793 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN4P51793 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms