Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS4P35443 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.9■□□□□ 0.46
THBS4P35443 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS4P35443 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS4P35443 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
THBS4P35443 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
THBS4P35443 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
THBS4P35443 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
THBS4P35443 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.89■□□□□ 0.45
THBS4P35443 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 AC008694.1-202ENST00000636953 945 ntBASIC17.89■□□□□ 0.45
THBS4P35443 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
THBS4P35443 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.89■□□□□ 0.45
THBS4P35443 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
THBS4P35443 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
THBS4P35443 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
THBS4P35443 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THBS4P35443 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
THBS4P35443 AC007225.1-201ENST00000566331 1836 ntBASIC17.88■□□□□ 0.45
THBS4P35443 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
THBS4P35443 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.88■□□□□ 0.45
THBS4P35443 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 AL355802.2-201ENST00000402069 882 ntBASIC17.88■□□□□ 0.45
THBS4P35443 TSPY6P-201ENST00000448518 926 ntBASIC17.88■□□□□ 0.45
THBS4P35443 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.88■□□□□ 0.45
THBS4P35443 AC069236.1-201ENST00000604339 616 ntBASIC17.88■□□□□ 0.45
THBS4P35443 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.88■□□□□ 0.45
THBS4P35443 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.88■□□□□ 0.45
THBS4P35443 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
THBS4P35443 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.88■□□□□ 0.45
THBS4P35443 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS4P35443 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 AC073314.1-201ENST00000568729 2216 ntBASIC17.87■□□□□ 0.45
THBS4P35443 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 AC091799.1-201ENST00000422823 811 ntBASIC17.87■□□□□ 0.45
THBS4P35443 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 OR10C1-204ENST00000622521 1039 ntBASIC17.87■□□□□ 0.45
THBS4P35443 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.87■□□□□ 0.45
THBS4P35443 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.87■□□□□ 0.45
THBS4P35443 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
THBS4P35443 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS4P35443 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.86■□□□□ 0.45
THBS4P35443 AC011484.1-201ENST00000377652 1995 ntBASIC17.86■□□□□ 0.45
THBS4P35443 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
THBS4P35443 SLC29A4P1-201ENST00000398760 971 ntBASIC17.86■□□□□ 0.45
THBS4P35443 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.86■□□□□ 0.45
THBS4P35443 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.86■□□□□ 0.45
THBS4P35443 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 AC016405.3-201ENST00000607710 860 ntBASIC17.86■□□□□ 0.45
THBS4P35443 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.86■□□□□ 0.45
THBS4P35443 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
THBS4P35443 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
THBS4P35443 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.86■□□□□ 0.45
THBS4P35443 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS4P35443 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
THBS4P35443 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
THBS4P35443 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.86■□□□□ 0.45
THBS4P35443 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms