Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NELFEP18615 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NELFEP18615 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.04■□□□□ 0.8
NELFEP18615 AC069152.1-201ENST00000438030 544 ntBASIC20.04■□□□□ 0.8
NELFEP18615 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NELFEP18615 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.04■□□□□ 0.8
NELFEP18615 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.04■□□□□ 0.8
NELFEP18615 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.04■□□□□ 0.8
NELFEP18615 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.04■□□□□ 0.8
NELFEP18615 AC133041.1-202ENST00000642053 222 ntBASIC20.04■□□□□ 0.8
NELFEP18615 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.04■□□□□ 0.8
NELFEP18615 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NELFEP18615 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NELFEP18615 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NELFEP18615 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NELFEP18615 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.03■□□□□ 0.8
NELFEP18615 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.03■□□□□ 0.8
NELFEP18615 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.03■□□□□ 0.8
NELFEP18615 AC016405.3-201ENST00000607710 860 ntBASIC20.03■□□□□ 0.8
NELFEP18615 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.03■□□□□ 0.8
NELFEP18615 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.03■□□□□ 0.8
NELFEP18615 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.03■□□□□ 0.8
NELFEP18615 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NELFEP18615 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NELFEP18615 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.02■□□□□ 0.8
NELFEP18615 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.02■□□□□ 0.8
NELFEP18615 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.02■□□□□ 0.8
NELFEP18615 AC093787.1-201ENST00000450396 207 ntBASIC20.02■□□□□ 0.8
NELFEP18615 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.02■□□□□ 0.8
NELFEP18615 MIR4758-201ENST00000577688 71 ntBASIC20.02■□□□□ 0.8
NELFEP18615 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.02■□□□□ 0.8
NELFEP18615 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.02■□□□□ 0.8
NELFEP18615 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.02■□□□□ 0.8
NELFEP18615 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NELFEP18615 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
NELFEP18615 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NELFEP18615 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NELFEP18615 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.02■□□□□ 0.79
NELFEP18615 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.01■□□□□ 0.79
NELFEP18615 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NELFEP18615 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NELFEP18615 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.01■□□□□ 0.79
NELFEP18615 MIPEPP3-201ENST00000412105 444 ntBASIC20.01■□□□□ 0.79
NELFEP18615 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 CD99P1-205ENST00000527459 561 ntBASIC20.01■□□□□ 0.79
NELFEP18615 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.01■□□□□ 0.79
NELFEP18615 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
NELFEP18615 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NELFEP18615 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NELFEP18615 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.01■□□□□ 0.79
NELFEP18615 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.01■□□□□ 0.79
NELFEP18615 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NELFEP18615 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20■□□□□ 0.79
NELFEP18615 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NELFEP18615 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
NELFEP18615 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NELFEP18615 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NELFEP18615 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NELFEP18615 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NELFEP18615 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NELFEP18615 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20■□□□□ 0.79
NELFEP18615 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NELFEP18615 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
NELFEP18615 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20■□□□□ 0.79
NELFEP18615 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NELFEP18615 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20■□□□□ 0.79
NELFEP18615 KRT18P6-201ENST00000555540 1265 ntBASIC20■□□□□ 0.79
NELFEP18615 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20■□□□□ 0.79
NELFEP18615 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20■□□□□ 0.79
NELFEP18615 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms