Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.64■□□□□ 0.73
LBPP18428 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.64■□□□□ 0.73
LBPP18428 AC010141.2-201ENST00000452426 721 ntBASIC19.64■□□□□ 0.73
LBPP18428 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.64■□□□□ 0.73
LBPP18428 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.64■□□□□ 0.73
LBPP18428 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
LBPP18428 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.64■□□□□ 0.73
LBPP18428 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LBPP18428 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LBPP18428 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.64■□□□□ 0.73
LBPP18428 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.64■□□□□ 0.73
LBPP18428 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LBPP18428 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBPP18428 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.64■□□□□ 0.73
LBPP18428 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LBPP18428 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LBPP18428 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.63■□□□□ 0.73
LBPP18428 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LBPP18428 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.63■□□□□ 0.73
LBPP18428 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LBPP18428 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LBPP18428 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.63■□□□□ 0.73
LBPP18428 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.63■□□□□ 0.73
LBPP18428 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LBPP18428 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.63■□□□□ 0.73
LBPP18428 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LBPP18428 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.63■□□□□ 0.73
LBPP18428 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBPP18428 SMG8-203ENST00000578922 2178 ntBASIC19.63■□□□□ 0.73
LBPP18428 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
LBPP18428 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.62■□□□□ 0.73
LBPP18428 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.62■□□□□ 0.73
LBPP18428 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LBPP18428 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LBPP18428 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LBPP18428 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.62■□□□□ 0.73
LBPP18428 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.62■□□□□ 0.73
LBPP18428 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.62■□□□□ 0.73
LBPP18428 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBPP18428 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LBPP18428 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LBPP18428 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.61■□□□□ 0.73
LBPP18428 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.61■□□□□ 0.73
LBPP18428 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.61■□□□□ 0.73
LBPP18428 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.61■□□□□ 0.73
LBPP18428 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.61■□□□□ 0.73
LBPP18428 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.61■□□□□ 0.73
LBPP18428 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LBPP18428 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.61■□□□□ 0.73
LBPP18428 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBPP18428 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LBPP18428 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.6■□□□□ 0.73
LBPP18428 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.6■□□□□ 0.73
LBPP18428 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.6■□□□□ 0.73
LBPP18428 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.6■□□□□ 0.73
LBPP18428 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.6■□□□□ 0.73
LBPP18428 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.6■□□□□ 0.73
LBPP18428 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LBPP18428 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LBPP18428 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms