Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDGFRAP16234 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDGFRAP16234 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.38■■□□□ 1.01
PDGFRAP16234 CYP2T1P-201ENST00000432607 1285 ntBASIC21.38■■□□□ 1.01
PDGFRAP16234 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PDGFRAP16234 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDGFRAP16234 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.37■■□□□ 1.01
PDGFRAP16234 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.37■■□□□ 1.01
PDGFRAP16234 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PDGFRAP16234 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDGFRAP16234 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDGFRAP16234 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.37■■□□□ 1.01
PDGFRAP16234 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 AC069236.1-201ENST00000604339 616 ntBASIC21.37■■□□□ 1.01
PDGFRAP16234 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.37■■□□□ 1.01
PDGFRAP16234 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDGFRAP16234 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PDGFRAP16234 AC020907.5-201ENST00000624372 1936 ntBASIC21.37■■□□□ 1.01
PDGFRAP16234 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDGFRAP16234 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.36■■□□□ 1.01
PDGFRAP16234 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.36■■□□□ 1.01
PDGFRAP16234 LINC01521-201ENST00000504184 1943 ntBASIC21.36■■□□□ 1.01
PDGFRAP16234 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PDGFRAP16234 GPX1P1-201ENST00000388829 606 ntBASIC21.36■■□□□ 1.01
PDGFRAP16234 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PDGFRAP16234 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.36■■□□□ 1.01
PDGFRAP16234 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.36■■□□□ 1.01
PDGFRAP16234 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.36■■□□□ 1.01
PDGFRAP16234 AL121832.2-201ENST00000610979 668 ntBASIC21.36■■□□□ 1.01
PDGFRAP16234 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PDGFRAP16234 AL109923.1-201ENST00000618799 583 ntBASIC21.36■■□□□ 1.01
PDGFRAP16234 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.36■■□□□ 1.01
PDGFRAP16234 AC008694.1-202ENST00000636953 945 ntBASIC21.36■■□□□ 1.01
PDGFRAP16234 CYP21A1P-202ENST00000354927 1481 ntBASIC21.36■■□□□ 1.01
PDGFRAP16234 GABARAPL3-202ENST00000624044 1851 ntBASIC21.36■■□□□ 1.01
PDGFRAP16234 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDGFRAP16234 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDGFRAP16234 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.36■■□□□ 1.01
PDGFRAP16234 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDGFRAP16234 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDGFRAP16234 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.35■■□□□ 1.01
PDGFRAP16234 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.35■■□□□ 1.01
PDGFRAP16234 AC083906.2-201ENST00000511578 360 ntBASIC21.35■■□□□ 1.01
PDGFRAP16234 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDGFRAP16234 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.35■■□□□ 1.01
PDGFRAP16234 AC104771.1-201ENST00000603335 964 ntBASIC21.35■■□□□ 1.01
PDGFRAP16234 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.35■■□□□ 1.01
PDGFRAP16234 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDGFRAP16234 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDGFRAP16234 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFRAP16234 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.34■■□□□ 1.01
PDGFRAP16234 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.34■■□□□ 1.01
PDGFRAP16234 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PDGFRAP16234 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFRAP16234 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.34■■□□□ 1.01
PDGFRAP16234 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFRAP16234 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFRAP16234 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFRAP16234 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFRAP16234 KRT8P36-201ENST00000489121 1440 ntBASIC21.34■■□□□ 1.01
PDGFRAP16234 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDGFRAP16234 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDGFRAP16234 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.33■■□□□ 1.01
PDGFRAP16234 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.33■■□□□ 1.01
PDGFRAP16234 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.33■■□□□ 1.01
PDGFRAP16234 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.33■■□□□ 1.01
PDGFRAP16234 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.33■■□□□ 1.01
PDGFRAP16234 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.33■■□□□ 1.01
PDGFRAP16234 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDGFRAP16234 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDGFRAP16234 AC087633.2-202ENST00000565166 1439 ntBASIC21.33■■□□□ 1.01
PDGFRAP16234 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms