Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.2■■□□□ 1.63
COL11A2P13942 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.2■■□□□ 1.63
COL11A2P13942 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.2■■□□□ 1.63
COL11A2P13942 AL121906.2-201ENST00000621597 723 ntBASIC25.2■■□□□ 1.63
COL11A2P13942 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
COL11A2P13942 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL11A2P13942 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL11A2P13942 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
COL11A2P13942 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
COL11A2P13942 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL11A2P13942 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.2■■□□□ 1.62
COL11A2P13942 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL11A2P13942 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.2■■□□□ 1.62
COL11A2P13942 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.2■■□□□ 1.62
COL11A2P13942 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
COL11A2P13942 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL11A2P13942 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.2■■□□□ 1.62
COL11A2P13942 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.19■■□□□ 1.62
COL11A2P13942 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL11A2P13942 MMP23A-201ENST00000234610 1017 ntBASIC25.19■■□□□ 1.62
COL11A2P13942 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL11A2P13942 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.19■■□□□ 1.62
COL11A2P13942 AL049597.2-201ENST00000565575 961 ntBASIC25.19■■□□□ 1.62
COL11A2P13942 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL11A2P13942 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL11A2P13942 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
COL11A2P13942 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL11A2P13942 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL11A2P13942 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL11A2P13942 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL11A2P13942 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.18■■□□□ 1.62
COL11A2P13942 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.18■■□□□ 1.62
COL11A2P13942 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.18■■□□□ 1.62
COL11A2P13942 AP000525.1-201ENST00000608286 694 ntBASIC25.18■■□□□ 1.62
COL11A2P13942 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL11A2P13942 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
COL11A2P13942 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.18■■□□□ 1.62
COL11A2P13942 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL11A2P13942 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
COL11A2P13942 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.17■■□□□ 1.62
COL11A2P13942 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
COL11A2P13942 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
COL11A2P13942 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.17■■□□□ 1.62
COL11A2P13942 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL11A2P13942 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.17■■□□□ 1.62
COL11A2P13942 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.17■■□□□ 1.62
COL11A2P13942 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL11A2P13942 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL11A2P13942 NBPF21P-201ENST00000425093 1451 ntBASIC25.16■■□□□ 1.62
COL11A2P13942 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.16■■□□□ 1.62
COL11A2P13942 AC005521.1-201ENST00000393351 872 ntBASIC25.16■■□□□ 1.62
COL11A2P13942 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL11A2P13942 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.16■■□□□ 1.62
COL11A2P13942 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.16■■□□□ 1.62
COL11A2P13942 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL11A2P13942 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL11A2P13942 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL11A2P13942 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
COL11A2P13942 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
COL11A2P13942 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.15■■□□□ 1.62
COL11A2P13942 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.15■■□□□ 1.62
COL11A2P13942 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.15■■□□□ 1.62
COL11A2P13942 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.15■■□□□ 1.62
COL11A2P13942 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.15■■□□□ 1.62
COL11A2P13942 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.15■■□□□ 1.62
COL11A2P13942 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.15■■□□□ 1.62
COL11A2P13942 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
COL11A2P13942 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 AL355355.2-201ENST00000442321 338 ntBASIC25.15■■□□□ 1.62
COL11A2P13942 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
COL11A2P13942 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL11A2P13942 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.15■■□□□ 1.62
COL11A2P13942 AL031963.3-201ENST00000606441 850 ntBASIC25.15■■□□□ 1.62
COL11A2P13942 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL11A2P13942 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.14■■□□□ 1.62
COL11A2P13942 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL11A2P13942 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL11A2P13942 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
COL11A2P13942 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL11A2P13942 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.14■■□□□ 1.61
COL11A2P13942 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL11A2P13942 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL11A2P13942 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL11A2P13942 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
COL11A2P13942 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.14■■□□□ 1.61
COL11A2P13942 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
COL11A2P13942 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL11A2P13942 TERF1P1-201ENST00000311003 1181 ntBASIC25.13■■□□□ 1.61
COL11A2P13942 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.13■■□□□ 1.61
COL11A2P13942 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
COL11A2P13942 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms