Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 REXO1L12P-201ENST00000622156 912 ntBASIC21.22■□□□□ 0.99
RHOP08100 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.22■□□□□ 0.99
RHOP08100 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.22■□□□□ 0.99
RHOP08100 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RHOP08100 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHOP08100 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RHOP08100 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RHOP08100 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
RHOP08100 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOP08100 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.21■□□□□ 0.99
RHOP08100 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.21■□□□□ 0.99
RHOP08100 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RHOP08100 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOP08100 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RHOP08100 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
RHOP08100 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RHOP08100 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOP08100 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RHOP08100 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.21■□□□□ 0.99
RHOP08100 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RHOP08100 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.21■□□□□ 0.99
RHOP08100 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.21■□□□□ 0.99
RHOP08100 AL049637.2-201ENST00000641778 930 ntBASIC21.21■□□□□ 0.99
RHOP08100 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.21■□□□□ 0.99
RHOP08100 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RHOP08100 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.21■□□□□ 0.99
RHOP08100 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.2■□□□□ 0.99
RHOP08100 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RHOP08100 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RHOP08100 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.2■□□□□ 0.98
RHOP08100 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.2■□□□□ 0.98
RHOP08100 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHOP08100 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.2■□□□□ 0.98
RHOP08100 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
RHOP08100 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOP08100 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOP08100 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOP08100 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RHOP08100 AC211429.1-201ENST00000415277 523 ntBASIC21.19■□□□□ 0.98
RHOP08100 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RHOP08100 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.19■□□□□ 0.98
RHOP08100 AP001412.1-201ENST00000608405 714 ntBASIC21.19■□□□□ 0.98
RHOP08100 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHOP08100 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHOP08100 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.19■□□□□ 0.98
RHOP08100 AL135905.2-201ENST00000584934 1404 ntBASIC21.19■□□□□ 0.98
RHOP08100 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.19■□□□□ 0.98
RHOP08100 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHOP08100 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOP08100 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOP08100 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.18■□□□□ 0.98
RHOP08100 AC244015.2-201ENST00000616358 1861 ntBASIC21.18■□□□□ 0.98
RHOP08100 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOP08100 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.18■□□□□ 0.98
RHOP08100 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.18■□□□□ 0.98
RHOP08100 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.18■□□□□ 0.98
RHOP08100 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.18■□□□□ 0.98
RHOP08100 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.18■□□□□ 0.98
RHOP08100 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RHOP08100 KRT17P2-201ENST00000300992 1314 ntBASIC21.18■□□□□ 0.98
RHOP08100 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOP08100 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOP08100 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.18■□□□□ 0.98
RHOP08100 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOP08100 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.18■□□□□ 0.98
RHOP08100 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHOP08100 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHOP08100 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHOP08100 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RHOP08100 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.17■□□□□ 0.98
RHOP08100 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.17■□□□□ 0.98
RHOP08100 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.17■□□□□ 0.98
RHOP08100 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.17■□□□□ 0.98
RHOP08100 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.17■□□□□ 0.98
RHOP08100 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RHOP08100 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RHOP08100 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHOP08100 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHOP08100 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHOP08100 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.17■□□□□ 0.98
RHOP08100 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.17■□□□□ 0.98
RHOP08100 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHOP08100 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RHOP08100 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.16■□□□□ 0.98
RHOP08100 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms