Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.27■□□□□ 0.52
PFDN1O60925 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.27■□□□□ 0.52
PFDN1O60925 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.27■□□□□ 0.52
PFDN1O60925 LINC01960-201ENST00000563759 1884 ntBASIC18.27■□□□□ 0.52
PFDN1O60925 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PFDN1O60925 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PFDN1O60925 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.27■□□□□ 0.52
PFDN1O60925 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PFDN1O60925 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PFDN1O60925 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.27■□□□□ 0.51
PFDN1O60925 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PFDN1O60925 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PFDN1O60925 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PFDN1O60925 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PFDN1O60925 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PFDN1O60925 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
PFDN1O60925 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
PFDN1O60925 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PFDN1O60925 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PFDN1O60925 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PFDN1O60925 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.26■□□□□ 0.51
PFDN1O60925 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
PFDN1O60925 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PFDN1O60925 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PFDN1O60925 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PFDN1O60925 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PFDN1O60925 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.25■□□□□ 0.51
PFDN1O60925 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PFDN1O60925 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.25■□□□□ 0.51
PFDN1O60925 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.25■□□□□ 0.51
PFDN1O60925 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.25■□□□□ 0.51
PFDN1O60925 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PFDN1O60925 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.25■□□□□ 0.51
PFDN1O60925 AC148477.6-201ENST00000623746 465 ntBASIC18.25■□□□□ 0.51
PFDN1O60925 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.25■□□□□ 0.51
PFDN1O60925 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PFDN1O60925 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.25■□□□□ 0.51
PFDN1O60925 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
PFDN1O60925 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 AC008813.1-201ENST00000536597 885 ntBASIC18.24■□□□□ 0.51
PFDN1O60925 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.24■□□□□ 0.51
PFDN1O60925 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.24■□□□□ 0.51
PFDN1O60925 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.24■□□□□ 0.51
PFDN1O60925 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
PFDN1O60925 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN1O60925 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PFDN1O60925 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.24■□□□□ 0.51
PFDN1O60925 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PFDN1O60925 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN1O60925 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PFDN1O60925 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms