Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SSX5O60225 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SSX5O60225 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSX5O60225 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX5O60225 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.39■□□□□ 0.37
SSX5O60225 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX5O60225 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.39■□□□□ 0.37
SSX5O60225 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 AIRN-201ENST00000601203 4374 ntBASIC17.39■□□□□ 0.37
SSX5O60225 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.39■□□□□ 0.37
SSX5O60225 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX5O60225 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SSX5O60225 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX5O60225 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX5O60225 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX5O60225 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX5O60225 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX5O60225 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX5O60225 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX5O60225 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.38■□□□□ 0.37
SSX5O60225 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.38■□□□□ 0.37
SSX5O60225 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSX5O60225 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SSX5O60225 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
SSX5O60225 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SSX5O60225 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.37■□□□□ 0.37
SSX5O60225 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SSX5O60225 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.37■□□□□ 0.37
SSX5O60225 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.37■□□□□ 0.37
SSX5O60225 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSX5O60225 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.37■□□□□ 0.37
SSX5O60225 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.37■□□□□ 0.37
SSX5O60225 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.37■□□□□ 0.37
SSX5O60225 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.37■□□□□ 0.37
SSX5O60225 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSX5O60225 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSX5O60225 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SSX5O60225 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SSX5O60225 AC087289.5-201ENST00000586076 3175 ntBASIC17.36■□□□□ 0.37
SSX5O60225 AC131281.2-201ENST00000520478 145 ntBASIC17.36■□□□□ 0.37
SSX5O60225 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.36■□□□□ 0.37
SSX5O60225 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.36■□□□□ 0.37
SSX5O60225 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.36■□□□□ 0.37
SSX5O60225 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SSX5O60225 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX5O60225 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSX5O60225 AC092720.2-201ENST00000602388 1665 ntBASIC17.36■□□□□ 0.37
SSX5O60225 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX5O60225 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSX5O60225 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SSX5O60225 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SSX5O60225 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SSX5O60225 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms