Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H3BM21 AP006294.2-201ENST00000641667 209 ntBASIC20.27■□□□□ 0.84
H3BM21 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3BM21 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
H3BM21 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.27■□□□□ 0.83
H3BM21 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
H3BM21 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H3BM21 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.26■□□□□ 0.83
H3BM21 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 AC128676.1-201ENST00000454392 318 ntBASIC20.26■□□□□ 0.83
H3BM21 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.26■□□□□ 0.83
H3BM21 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.26■□□□□ 0.83
H3BM21 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
H3BM21 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.26■□□□□ 0.83
H3BM21 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.26■□□□□ 0.83
H3BM21 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.26■□□□□ 0.83
H3BM21 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H3BM21 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
H3BM21 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.25■□□□□ 0.83
H3BM21 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
H3BM21 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.25■□□□□ 0.83
H3BM21 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.25■□□□□ 0.83
H3BM21 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
H3BM21 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H3BM21 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.25■□□□□ 0.83
H3BM21 CYP21A1P-202ENST00000354927 1481 ntBASIC20.24■□□□□ 0.83
H3BM21 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.24■□□□□ 0.83
H3BM21 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.24■□□□□ 0.83
H3BM21 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.24■□□□□ 0.83
H3BM21 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.24■□□□□ 0.83
H3BM21 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.24■□□□□ 0.83
H3BM21 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.24■□□□□ 0.83
H3BM21 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
H3BM21 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.24■□□□□ 0.83
H3BM21 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.24■□□□□ 0.83
H3BM21 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.23■□□□□ 0.83
H3BM21 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H3BM21 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3BM21 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H3BM21 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H3BM21 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
H3BM21 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.23■□□□□ 0.83
H3BM21 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.23■□□□□ 0.83
H3BM21 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H3BM21 AC098590.1-201ENST00000468126 897 ntBASIC20.23■□□□□ 0.83
H3BM21 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.23■□□□□ 0.83
H3BM21 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
H3BM21 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3BM21 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3BM21 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
H3BM21 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
H3BM21 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.23■□□□□ 0.83
H3BM21 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.22■□□□□ 0.83
H3BM21 AC121338.2-201ENST00000622535 1744 ntBASIC20.22■□□□□ 0.83
H3BM21 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.22■□□□□ 0.83
H3BM21 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.22■□□□□ 0.83
H3BM21 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
H3BM21 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.22■□□□□ 0.83
H3BM21 GCSHP5-201ENST00000443090 522 ntBASIC20.22■□□□□ 0.83
H3BM21 RPS2P52-201ENST00000469610 820 ntBASIC20.22■□□□□ 0.83
H3BM21 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.22■□□□□ 0.83
H3BM21 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms