Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RCCD1A6NED2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RCCD1A6NED2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RCCD1A6NED2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RCCD1A6NED2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.67■■□□□ 1.06
RCCD1A6NED2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RCCD1A6NED2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 AL358852.1-201ENST00000623174 1268 ntBASIC21.67■■□□□ 1.06
RCCD1A6NED2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCCD1A6NED2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RCCD1A6NED2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RCCD1A6NED2 IRS3P-201ENST00000223076 1006 ntBASIC21.66■■□□□ 1.06
RCCD1A6NED2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.66■■□□□ 1.06
RCCD1A6NED2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.66■■□□□ 1.06
RCCD1A6NED2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RCCD1A6NED2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.66■■□□□ 1.06
RCCD1A6NED2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCCD1A6NED2 AL020996.1-203ENST00000536896 2307 ntBASIC21.66■■□□□ 1.06
RCCD1A6NED2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.66■■□□□ 1.06
RCCD1A6NED2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.65■■□□□ 1.06
RCCD1A6NED2 AC098818.2-201ENST00000564925 2320 ntBASIC21.65■■□□□ 1.06
RCCD1A6NED2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.65■■□□□ 1.06
RCCD1A6NED2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.65■■□□□ 1.06
RCCD1A6NED2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.65■■□□□ 1.06
RCCD1A6NED2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.65■■□□□ 1.06
RCCD1A6NED2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RCCD1A6NED2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RCCD1A6NED2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RCCD1A6NED2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.64■■□□□ 1.06
RCCD1A6NED2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.64■■□□□ 1.06
RCCD1A6NED2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RCCD1A6NED2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RCCD1A6NED2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RCCD1A6NED2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RCCD1A6NED2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RCCD1A6NED2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RCCD1A6NED2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RCCD1A6NED2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.64■■□□□ 1.05
RCCD1A6NED2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RCCD1A6NED2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RCCD1A6NED2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCCD1A6NED2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCCD1A6NED2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCCD1A6NED2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCCD1A6NED2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCCD1A6NED2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RCCD1A6NED2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.64■■□□□ 1.05
RCCD1A6NED2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 AC104187.1-201ENST00000607510 612 ntBASIC21.63■■□□□ 1.05
RCCD1A6NED2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.63■■□□□ 1.05
RCCD1A6NED2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCCD1A6NED2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms