Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 RNA5SP427-201ENST00000365323 119 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 U3.33-201ENST00000408117 204 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AL441943.3-201ENST00000418524 587 ntTSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 RPS29P16-201ENST00000452798 171 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AC244505.1-201ENST00000502642 307 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AL390728.6-201ENST00000566446 1246 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AL356052.1-201ENST00000605764 376 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 AC106800.1-201ENST00000501221 1362 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
SYCE2Q6PIF2 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AL035071.1-201ENST00000569087 2131 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AL034417.4-201ENST00000641354 2101 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 MTRNR2L1-201ENST00000540040 1553 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 DBIL5P2-202ENST00000491724 1692 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 TRAPPC3L-202ENST00000368602 1113 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 APOM-202ENST00000375918 922 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC025062.1-201ENST00000465163 644 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 RPL5P17-201ENST00000469685 877 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC226119.2-201ENST00000513501 530 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC078962.2-201ENST00000541885 712 ntTSL 3 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC044798.2-201ENST00000564222 1235 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 FRG2HP-201ENST00000568807 832 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC090079.1-201ENST00000572092 1183 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 MIR5010-201ENST00000582846 120 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 RPL10P15-201ENST00000585756 315 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 FAM30B-201ENST00000611556 397 ntBASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms