RNA–Protein interactions for RNA: ENST00000615112.4

NCAM1-221, Transcript of neural cell adhesion molecule 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NCAM1, Length 5,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-221ENST00000615112 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
NCAM1-221ENST00000615112 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
NCAM1-221ENST00000615112 SUPT5HO00267 1087 aaKnown RBP16.01■□□□□ 0.15
NCAM1-221ENST00000615112 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
NCAM1-221ENST00000615112 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
NCAM1-221ENST00000615112 APLP2Q06481 763 aa15.45■□□□□ 0.06
NCAM1-221ENST00000615112 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
NCAM1-221ENST00000615112 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
NCAM1-221ENST00000615112 ABCC9O60706 1549 aa14.99□□□□□ -0.01
NCAM1-221ENST00000615112 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
NCAM1-221ENST00000615112 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.04
NCAM1-221ENST00000615112 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
NCAM1-221ENST00000615112 CCDC180Q9P1Z9 1646 aa14.71□□□□□ -0.05
NCAM1-221ENST00000615112 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
NCAM1-221ENST00000615112 ZEB1P37275 1124 aaPredicted RBP14.67□□□□□ -0.06
NCAM1-221ENST00000615112 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
NCAM1-221ENST00000615112 TTBK1Q5TCY1 1321 aaPredicted RBP14.53□□□□□ -0.08
NCAM1-221ENST00000615112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
NCAM1-221ENST00000615112 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
NCAM1-221ENST00000615112 PCGF6Q9BYE7 350 aa14.46□□□□□ -0.09
NCAM1-221ENST00000615112 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
NCAM1-221ENST00000615112 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
NCAM1-221ENST00000615112 MYT1LQ9UL68 1186 aa14.4□□□□□ -0.11
NCAM1-221ENST00000615112 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
NCAM1-221ENST00000615112 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
NCAM1-221ENST00000615112 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
NCAM1-221ENST00000615112 NACADO15069 1562 aa14.29□□□□□ -0.12
NCAM1-221ENST00000615112 TRIM26Q12899 539 aaPredicted RBP14.26□□□□□ -0.13
NCAM1-221ENST00000615112 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
NCAM1-221ENST00000615112 FBLN2P98095 1184 aa14.12□□□□□ -0.15
NCAM1-221ENST00000615112 ITGAEP38570 1179 aa14.09□□□□□ -0.15
NCAM1-221ENST00000615112 DCAF1Q9Y4B6 1507 aa14.07□□□□□ -0.16
NCAM1-221ENST00000615112 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
NCAM1-221ENST00000615112 NEFLP07196 543 aa14.04□□□□□ -0.16
NCAM1-221ENST00000615112 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
NCAM1-221ENST00000615112 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
NCAM1-221ENST00000615112 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
NCAM1-221ENST00000615112 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
NCAM1-221ENST00000615112 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
NCAM1-221ENST00000615112 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
NCAM1-221ENST00000615112 TRIM52Q96A61 297 aa13.9□□□□□ -0.18
NCAM1-221ENST00000615112 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
NCAM1-221ENST00000615112 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
NCAM1-221ENST00000615112 EEA1Q15075 1411 aa13.83□□□□□ -0.19
NCAM1-221ENST00000615112 POLR3GLQ9BT43 218 aa13.83□□□□□ -0.19
NCAM1-221ENST00000615112 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
NCAM1-221ENST00000615112 ESF1Q9H501 851 aaKnown RBP13.8□□□□□ -0.2
NCAM1-221ENST00000615112 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
NCAM1-221ENST00000615112 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
NCAM1-221ENST00000615112 ACIN1Q9UKV3 1341 aaKnown RBP13.75□□□□□ -0.21
NCAM1-221ENST00000615112 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
NCAM1-221ENST00000615112 P3H3Q8IVL6 736 aa13.73□□□□□ -0.21
NCAM1-221ENST00000615112 HRCP23327 699 aa13.7□□□□□ -0.22
NCAM1-221ENST00000615112 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
NCAM1-221ENST00000615112 MYT1Q01538 1121 aa13.68□□□□□ -0.22
NCAM1-221ENST00000615112 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
NCAM1-221ENST00000615112 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
NCAM1-221ENST00000615112 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
NCAM1-221ENST00000615112 KIF27Q86VH2 1401 aa13.66□□□□□ -0.22
NCAM1-221ENST00000615112 YTHDC1Q96MU7 727 aaKnown RBP13.62□□□□□ -0.23
NCAM1-221ENST00000615112 BCANQ96GW7 911 aa13.61□□□□□ -0.23
NCAM1-221ENST00000615112 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
NCAM1-221ENST00000615112 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
NCAM1-221ENST00000615112 NEUROD1Q13562 356 aa13.59□□□□□ -0.23
NCAM1-221ENST00000615112 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
NCAM1-221ENST00000615112 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
NCAM1-221ENST00000615112 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
NCAM1-221ENST00000615112 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
NCAM1-221ENST00000615112 NEFMP07197 916 aa13.57□□□□□ -0.24
NCAM1-221ENST00000615112 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
NCAM1-221ENST00000615112 ZNF326Q5BKZ1 582 aaKnown RBP13.55□□□□□ -0.24
NCAM1-221ENST00000615112 CLIP1P30622 1438 aa13.54□□□□□ -0.24
NCAM1-221ENST00000615112 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
NCAM1-221ENST00000615112 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
NCAM1-221ENST00000615112 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
NCAM1-221ENST00000615112 ANP32CO43423 234 aa13.51□□□□□ -0.25
NCAM1-221ENST00000615112 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
NCAM1-221ENST00000615112 DIEXFQ68CQ4 756 aaKnown RBP13.45□□□□□ -0.26
NCAM1-221ENST00000615112 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
NCAM1-221ENST00000615112 CNGB1Q14028 1251 aaPredicted RBP13.43□□□□□ -0.26
NCAM1-221ENST00000615112 CHGAP10645 457 aaKnown RBP13.41□□□□□ -0.26
NCAM1-221ENST00000615112 TNIKQ9UKE5 1360 aa13.41□□□□□ -0.26
NCAM1-221ENST00000615112 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
NCAM1-221ENST00000615112 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
NCAM1-221ENST00000615112 CARMIL2Q6F5E8 1435 aa13.36□□□□□ -0.27
NCAM1-221ENST00000615112 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
NCAM1-221ENST00000615112 CUX2O14529 1486 aa13.36□□□□□ -0.27
NCAM1-221ENST00000615112 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
NCAM1-221ENST00000615112 CARMIL1Q5VZK9 1371 aa13.35□□□□□ -0.27
NCAM1-221ENST00000615112 CADPSQ9ULU8 1353 aa13.34□□□□□ -0.27
NCAM1-221ENST00000615112 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
NCAM1-221ENST00000615112 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
NCAM1-221ENST00000615112 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.27
NCAM1-221ENST00000615112 ABCC8Q09428 1581 aa13.33□□□□□ -0.28
NCAM1-221ENST00000615112 CFDP1Q9UEE9 299 aaPredicted RBP13.33□□□□□ -0.28
NCAM1-221ENST00000615112 KCNH8Q96L42 1107 aa13.32□□□□□ -0.28
NCAM1-221ENST00000615112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
NCAM1-221ENST00000615112 CCDC88BA6NC98 1476 aa13.3□□□□□ -0.28
NCAM1-221ENST00000615112 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
NCAM1-221ENST00000615112 SOGA1O94964 1423 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms