RNA–Protein interactions for RNA: ENST00000520902.1

LINC01299-201, Transcript of long intergenic non-protein coding RNA 1299, humanhuman

TSL 2 BASIC

Gene LINC01299, Length 2,634 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01299-201ENST00000520902 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
LINC01299-201ENST00000520902 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
LINC01299-201ENST00000520902 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
LINC01299-201ENST00000520902 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
LINC01299-201ENST00000520902 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
LINC01299-201ENST00000520902 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
LINC01299-201ENST00000520902 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
LINC01299-201ENST00000520902 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
LINC01299-201ENST00000520902 NACADO15069 1562 aa16.4■□□□□ 0.22
LINC01299-201ENST00000520902 ABCC9O60706 1549 aa16.36■□□□□ 0.21
LINC01299-201ENST00000520902 MYT1Q01538 1121 aa16.23■□□□□ 0.19
LINC01299-201ENST00000520902 SCRIBQ14160 1630 aa16.21■□□□□ 0.19
LINC01299-201ENST00000520902 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
LINC01299-201ENST00000520902 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
LINC01299-201ENST00000520902 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
LINC01299-201ENST00000520902 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.12
LINC01299-201ENST00000520902 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
LINC01299-201ENST00000520902 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
LINC01299-201ENST00000520902 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
LINC01299-201ENST00000520902 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
LINC01299-201ENST00000520902 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
LINC01299-201ENST00000520902 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
LINC01299-201ENST00000520902 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
LINC01299-201ENST00000520902 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
LINC01299-201ENST00000520902 WIZO95785 1651 aa15.59■□□□□ 0.09
LINC01299-201ENST00000520902 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
LINC01299-201ENST00000520902 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.06
LINC01299-201ENST00000520902 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC01299-201ENST00000520902 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
LINC01299-201ENST00000520902 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
LINC01299-201ENST00000520902 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
LINC01299-201ENST00000520902 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.04
LINC01299-201ENST00000520902 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
LINC01299-201ENST00000520902 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
LINC01299-201ENST00000520902 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
LINC01299-201ENST00000520902 HRCP23327 699 aa15.22■□□□□ 0.03
LINC01299-201ENST00000520902 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
LINC01299-201ENST00000520902 APLP2Q06481 763 aa15.21■□□□□ 0.03
LINC01299-201ENST00000520902 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
LINC01299-201ENST00000520902 HMGXB3Q12766 1538 aa15.15■□□□□ 0.02
LINC01299-201ENST00000520902 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
LINC01299-201ENST00000520902 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
LINC01299-201ENST00000520902 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
LINC01299-201ENST00000520902 ABCC8Q09428 1581 aa15.02■□□□□ -0
LINC01299-201ENST00000520902 PPARGC1BQ86YN6 1023 aaKnown RBP15.01□□□□□ -0.01
LINC01299-201ENST00000520902 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
LINC01299-201ENST00000520902 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
LINC01299-201ENST00000520902 EEA1Q15075 1411 aa14.93□□□□□ -0.02
LINC01299-201ENST00000520902 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
LINC01299-201ENST00000520902 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
LINC01299-201ENST00000520902 CFTRP13569 1480 aa14.85□□□□□ -0.03
LINC01299-201ENST00000520902 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
LINC01299-201ENST00000520902 PRDM2Q13029 1718 aa14.82□□□□□ -0.04
LINC01299-201ENST00000520902 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
LINC01299-201ENST00000520902 SOGA1O94964 1423 aa14.8□□□□□ -0.04
LINC01299-201ENST00000520902 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
LINC01299-201ENST00000520902 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
LINC01299-201ENST00000520902 RUSC2Q8N2Y8 1516 aa14.71□□□□□ -0.05
LINC01299-201ENST00000520902 KIF21BO75037 1637 aa14.71□□□□□ -0.05
LINC01299-201ENST00000520902 TNIKQ9UKE5 1360 aa14.7□□□□□ -0.06
LINC01299-201ENST00000520902 CUX1P39880 1505 aa14.69□□□□□ -0.06
LINC01299-201ENST00000520902 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
LINC01299-201ENST00000520902 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
LINC01299-201ENST00000520902 TRIM26Q12899 539 aaPredicted RBP14.62□□□□□ -0.07
LINC01299-201ENST00000520902 CEP162Q5TB80 1403 aa14.61□□□□□ -0.07
LINC01299-201ENST00000520902 PCGF6Q9BYE7 350 aa14.6□□□□□ -0.07
LINC01299-201ENST00000520902 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
LINC01299-201ENST00000520902 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
LINC01299-201ENST00000520902 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
LINC01299-201ENST00000520902 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
LINC01299-201ENST00000520902 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
LINC01299-201ENST00000520902 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
LINC01299-201ENST00000520902 PRXQ9BXM0 1461 aa14.54□□□□□ -0.08
LINC01299-201ENST00000520902 DAXXQ9UER7 740 aaPredicted RBP14.52□□□□□ -0.09
LINC01299-201ENST00000520902 DNMBPQ6XZF7 1577 aa14.51□□□□□ -0.09
LINC01299-201ENST00000520902 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
LINC01299-201ENST00000520902 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
LINC01299-201ENST00000520902 FGD5Q6ZNL6 1462 aa14.48□□□□□ -0.09
LINC01299-201ENST00000520902 NESP48681 1621 aa14.45□□□□□ -0.1
LINC01299-201ENST00000520902 CLIP1P30622 1438 aa14.43□□□□□ -0.1
LINC01299-201ENST00000520902 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
LINC01299-201ENST00000520902 CUX2O14529 1486 aa14.42□□□□□ -0.1
LINC01299-201ENST00000520902 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
LINC01299-201ENST00000520902 EIF5BO60841 1220 aaKnown RBP14.4□□□□□ -0.1
LINC01299-201ENST00000520902 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
LINC01299-201ENST00000520902 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
LINC01299-201ENST00000520902 IGF1RP08069 1367 aa14.37□□□□□ -0.11
LINC01299-201ENST00000520902 VPS8Q8N3P4 1428 aa14.37□□□□□ -0.11
LINC01299-201ENST00000520902 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
LINC01299-201ENST00000520902 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
LINC01299-201ENST00000520902 ACIN1Q9UKV3 1341 aaKnown RBP14.35□□□□□ -0.11
LINC01299-201ENST00000520902 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
LINC01299-201ENST00000520902 PLEKHG5O94827 1062 aa14.32□□□□□ -0.12
LINC01299-201ENST00000520902 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
LINC01299-201ENST00000520902 NEUROD1Q13562 356 aa14.32□□□□□ -0.12
LINC01299-201ENST00000520902 CUL7Q14999 1698 aa14.3□□□□□ -0.12
LINC01299-201ENST00000520902 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
LINC01299-201ENST00000520902 CARMIL1Q5VZK9 1371 aa14.3□□□□□ -0.12
LINC01299-201ENST00000520902 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
LINC01299-201ENST00000520902 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms