RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
CACNA1C-225ENST00000480911 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
CACNA1C-225ENST00000480911 FAM9AQ8IZU1 332 aaPredicted RBP14.92□□□□□ -0.02
CACNA1C-225ENST00000480911 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
CACNA1C-225ENST00000480911 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
CACNA1C-225ENST00000480911 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.08
CACNA1C-225ENST00000480911 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
CACNA1C-225ENST00000480911 ZEB1P37275 1124 aaPredicted RBP14.44□□□□□ -0.1
CACNA1C-225ENST00000480911 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
CACNA1C-225ENST00000480911 MYT1Q01538 1121 aa14.27□□□□□ -0.13
CACNA1C-225ENST00000480911 CCER1Q8TC90 406 aaPredicted RBP14.24□□□□□ -0.13
CACNA1C-225ENST00000480911 ABCC9O60706 1549 aa14.23□□□□□ -0.13
CACNA1C-225ENST00000480911 HRCP23327 699 aa14.15□□□□□ -0.14
CACNA1C-225ENST00000480911 APLP2Q06481 763 aa14.13□□□□□ -0.15
CACNA1C-225ENST00000480911 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
CACNA1C-225ENST00000480911 ATP1B4Q9UN42 357 aaPredicted RBP14.03□□□□□ -0.16
CACNA1C-225ENST00000480911 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
CACNA1C-225ENST00000480911 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
CACNA1C-225ENST00000480911 TRIM26Q12899 539 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-225ENST00000480911 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-225ENST00000480911 CHIC1Q5VXU3 224 aa13.94□□□□□ -0.18
CACNA1C-225ENST00000480911 TTBK1Q5TCY1 1321 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-225ENST00000480911 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-225ENST00000480911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-225ENST00000480911 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
CACNA1C-225ENST00000480911 DAXXQ9UER7 740 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-225ENST00000480911 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
CACNA1C-225ENST00000480911 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-225ENST00000480911 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
CACNA1C-225ENST00000480911 NEFLP07196 543 aa13.69□□□□□ -0.22
CACNA1C-225ENST00000480911 FBLN2P98095 1184 aa13.69□□□□□ -0.22
CACNA1C-225ENST00000480911 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
CACNA1C-225ENST00000480911 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-225ENST00000480911 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-225ENST00000480911 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-225ENST00000480911 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
CACNA1C-225ENST00000480911 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.26
CACNA1C-225ENST00000480911 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
CACNA1C-225ENST00000480911 ESF1Q9H501 851 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-225ENST00000480911 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-225ENST00000480911 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-225ENST00000480911 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
CACNA1C-225ENST00000480911 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
CACNA1C-225ENST00000480911 BCANQ96GW7 911 aa13.27□□□□□ -0.29
CACNA1C-225ENST00000480911 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-225ENST00000480911 RB1CC1Q8TDY2 1594 aa13.26□□□□□ -0.29
CACNA1C-225ENST00000480911 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
CACNA1C-225ENST00000480911 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
CACNA1C-225ENST00000480911 EEA1Q15075 1411 aa13.2□□□□□ -0.3
CACNA1C-225ENST00000480911 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-225ENST00000480911 AEBP2Q6ZN18 517 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-225ENST00000480911 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
CACNA1C-225ENST00000480911 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-225ENST00000480911 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-225ENST00000480911 ACIN1Q9UKV3 1341 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-225ENST00000480911 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
CACNA1C-225ENST00000480911 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
CACNA1C-225ENST00000480911 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-225ENST00000480911 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-225ENST00000480911 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-225ENST00000480911 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
CACNA1C-225ENST00000480911 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
CACNA1C-225ENST00000480911 ITGAEP38570 1179 aa12.96□□□□□ -0.33
CACNA1C-225ENST00000480911 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-225ENST00000480911 NACADO15069 1562 aa12.94□□□□□ -0.34
CACNA1C-225ENST00000480911 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
CACNA1C-225ENST00000480911 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-225ENST00000480911 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
CACNA1C-225ENST00000480911 CDK11BP21127 795 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-225ENST00000480911 TNIKQ9UKE5 1360 aa12.9□□□□□ -0.35
CACNA1C-225ENST00000480911 ZNF777Q9ULD5 760 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-225ENST00000480911 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
CACNA1C-225ENST00000480911 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-225ENST00000480911 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
CACNA1C-225ENST00000480911 BAZ1AQ9NRL2 1556 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-225ENST00000480911 WRNQ14191 1432 aaPredicted RBP eCLIP12.77□□□□□ -0.36
CACNA1C-225ENST00000480911 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-225ENST00000480911 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
CACNA1C-225ENST00000480911 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-225ENST00000480911 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-225ENST00000480911 C14orf37Q86TY3 774 aa12.74□□□□□ -0.37
CACNA1C-225ENST00000480911 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-225ENST00000480911 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
CACNA1C-225ENST00000480911 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
CACNA1C-225ENST00000480911 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-225ENST00000480911 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
CACNA1C-225ENST00000480911 NEFMP07197 916 aa12.71□□□□□ -0.37
CACNA1C-225ENST00000480911 EIF5BO60841 1220 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-225ENST00000480911 NEUROD1Q13562 356 aa12.7□□□□□ -0.38
CACNA1C-225ENST00000480911 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-225ENST00000480911 CLIP1P30622 1438 aa12.69□□□□□ -0.38
CACNA1C-225ENST00000480911 A0A0G2JS52 829 aa12.69□□□□□ -0.38
CACNA1C-225ENST00000480911 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
CACNA1C-225ENST00000480911 ANP32CO43423 234 aa12.68□□□□□ -0.38
CACNA1C-225ENST00000480911 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-225ENST00000480911 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-225ENST00000480911 CECR2Q9BXF3 1484 aa12.64□□□□□ -0.39
CACNA1C-225ENST00000480911 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-225ENST00000480911 PPP1R15AO75807 674 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-225ENST00000480911 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms