Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 YPEL3-211ENST00000568681 1739 ntTSL 213.07□□□□□ -0.324e-13■■□□□ 14
PRPF8Q6P2Q9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.03□□□□□ -0.321e-6■■□□□ 14
PRPF8Q6P2Q9 SRRM2-225ENST00000576076 914 nt13.85□□□□□ -0.191e-50■■□□□ 14
PRPF8Q6P2Q9 SRRM2-209ENST00000572278 711 ntTSL 27.77□□□□□ -1.171e-50■■□□□ 14
PRPF8Q6P2Q9 CARS2-205ENST00000480437 486 ntTSL 216.46■□□□□ 0.233e-7■■□□□ 14
PRPF8Q6P2Q9 CARS2-204ENST00000471986 218 ntTSL 513.5□□□□□ -0.253e-7■■□□□ 14
PRPF8Q6P2Q9 CARS2-221ENST00000540215 630 ntTSL 312.39□□□□□ -0.433e-7■■□□□ 14
PRPF8Q6P2Q9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.68■□□□□ 0.262e-14■■□□□ 14
PRPF8Q6P2Q9 EPS8L2-220ENST00000531393 2304 ntTSL 1 (best)14.97□□□□□ -0.012e-14■■□□□ 14
PRPF8Q6P2Q9 OARD1-213ENST00000482853 1245 ntTSL 216.17■□□□□ 0.183e-6■■□□□ 14
PRPF8Q6P2Q9 PARN-210ENST00000563697 508 ntTSL 56.45□□□□□ -1.384e-6■■□□□ 14
PRPF8Q6P2Q9 PARN-206ENST00000562715 505 ntTSL 21.92□□□□□ -2.14e-6■■□□□ 14
PRPF8Q6P2Q9 RPL36AL-201ENST00000298289 746 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.781e-14■■□□□ 14
PRPF8Q6P2Q9 SPHK1-206ENST00000590379 588 ntTSL 317.78■□□□□ 0.442e-21■■□□□ 14
PRPF8Q6P2Q9 MARS-217ENST00000549074 532 ntTSL 416.33■□□□□ 0.29e-7■■□□□ 14
PRPF8Q6P2Q9 MARS-213ENST00000548674 749 ntTSL 513.3□□□□□ -0.289e-7■■□□□ 14
PRPF8Q6P2Q9 CLUHP3-203ENST00000431761 723 ntTSL 311.09□□□□□ -0.637e-8■■□□□ 14
PRPF8Q6P2Q9 PDXK-214ENST00000476084 602 ntTSL 319.47■□□□□ 0.714e-15■■□□□ 14
PRPF8Q6P2Q9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.55■□□□□ 0.244e-15■■□□□ 14
PRPF8Q6P2Q9 MEIOB-204ENST00000460494 605 ntTSL 318.56■□□□□ 0.568e-8■■□□□ 14
PRPF8Q6P2Q9 SPATS2L-222ENST00000460095 775 ntTSL 59.38□□□□□ -0.913e-6■■□□□ 14
PRPF8Q6P2Q9 SPATS2L-223ENST00000462190 745 ntTSL 27.23□□□□□ -1.253e-6■■□□□ 14
PRPF8Q6P2Q9 SORBS3-218ENST00000523740 983 ntTSL 318.54■□□□□ 0.561e-6■■□□□ 14
PRPF8Q6P2Q9 SORBS3-212ENST00000521787 561 ntTSL 416.87■□□□□ 0.291e-6■■□□□ 14
PRPF8Q6P2Q9 SORBS3-214ENST00000522315 563 ntTSL 415.55■□□□□ 0.081e-6■■□□□ 14
PRPF8Q6P2Q9 SORBS3-207ENST00000519453 560 ntTSL 413.51□□□□□ -0.251e-6■■□□□ 14
PRPF8Q6P2Q9 SORBS3-219ENST00000523900 670 ntTSL 312.51□□□□□ -0.411e-6■■□□□ 14
PRPF8Q6P2Q9 RABGGTA-207ENST00000558936 648 ntTSL 210.74□□□□□ -0.693e-6■■□□□ 14
PRPF8Q6P2Q9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.06■□□□□ 0.161e-9■■□□□ 14
PRPF8Q6P2Q9 PIEZO1-208ENST00000484567 2464 ntTSL 213.86□□□□□ -0.191e-9■■□□□ 14
PRPF8Q6P2Q9 PGS1-214ENST00000591996 3062 ntTSL 1 (best)9.95□□□□□ -0.827e-9■■□□□ 14
PRPF8Q6P2Q9 RABGGTA-219ENST00000560871 886 ntTSL 512.96□□□□□ -0.331e-6■■□□□ 14
PRPF8Q6P2Q9 ANO8-202ENST00000597643 4618 ntTSL 218.88■□□□□ 0.612e-6■■□□□ 14
PRPF8Q6P2Q9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.452e-6■■□□□ 14
PRPF8Q6P2Q9 RNPS1-207ENST00000562690 582 ntTSL 212.72□□□□□ -0.372e-9■■□□□ 14
PRPF8Q6P2Q9 F7-203ENST00000444337 564 ntTSL 517.08■□□□□ 0.322e-6■■□□□ 14
PRPF8Q6P2Q9 FDPS-211ENST00000477057 741 ntTSL 210.51□□□□□ -0.733e-9■■□□□ 14
PRPF8Q6P2Q9 ATXN2-222ENST00000550889 1703 ntTSL 23.85□□□□□ -1.799e-9■■□□□ 14
PRPF8Q6P2Q9 UBA3-207ENST00000465108 804 ntTSL 211.61□□□□□ -0.555e-6■■□□□ 14
PRPF8Q6P2Q9 UBA3-212ENST00000630585 390 ntTSL 4 BASIC10.57□□□□□ -0.725e-6■■□□□ 14
PRPF8Q6P2Q9 INTS11-211ENST00000461514 913 ntTSL 217.81■□□□□ 0.442e-6■■□□□ 14
PRPF8Q6P2Q9 INTS11-225ENST00000525164 816 ntTSL 316.15■□□□□ 0.182e-6■■□□□ 14
PRPF8Q6P2Q9 INTS11-228ENST00000525769 695 ntTSL 316.15■□□□□ 0.182e-6■■□□□ 14
PRPF8Q6P2Q9 INTS11-217ENST00000485710 883 ntTSL 515.48■□□□□ 0.072e-6■■□□□ 14
PRPF8Q6P2Q9 MUS81-217ENST00000533555 547 ntTSL 49.63□□□□□ -0.871e-6■■□□□ 14
PRPF8Q6P2Q9 PNN-204ENST00000554902 583 ntTSL 23.31□□□□□ -1.887e-7■■□□□ 14
PRPF8Q6P2Q9 PNN-206ENST00000557680 912 ntTSL 30.87□□□□□ -2.277e-7■■□□□ 14
PRPF8Q6P2Q9 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.794e-7■■□□□ 14
PRPF8Q6P2Q9 FAM193B-210ENST00000507587 825 ntTSL 215.2■□□□□ 0.025e-19■■□□□ 14
PRPF8Q6P2Q9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.06■□□□□ 0.164e-9■■□□□ 14
PRPF8Q6P2Q9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.755e-9■■□□□ 14
PRPF8Q6P2Q9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.295e-9■■□□□ 14
PRPF8Q6P2Q9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.143e-7■■□□□ 14
PRPF8Q6P2Q9 ABHD14A-ACY1-210ENST00000636029 740 ntTSL 516.34■□□□□ 0.212e-8■■□□□ 14
PRPF8Q6P2Q9 ACY1-211ENST00000496679 781 ntTSL 215.27■□□□□ 0.042e-8■■□□□ 14
PRPF8Q6P2Q9 C1orf159-219ENST00000487177 3315 ntTSL 212.59□□□□□ -0.391e-6■■□□□ 14
PRPF8Q6P2Q9 AC004890.2-203ENST00000481817 943 ntTSL 214.76□□□□□ -0.052e-6■■□□□ 13.9
PRPF8Q6P2Q9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.43□□□□□ -0.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 ACAA1-215ENST00000469600 876 ntTSL 212.06□□□□□ -0.484e-8■■□□□ 13.9
PRPF8Q6P2Q9 MVD-206ENST00000563170 904 ntTSL 314.08□□□□□ -0.163e-10■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-203ENST00000407117 789 ntTSL 323.81■■□□□ 1.43e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-205ENST00000413497 794 ntTSL 318.2■□□□□ 0.53e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-207ENST00000434930 735 ntTSL 517.69■□□□□ 0.423e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.64■□□□□ 0.253e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.253e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.23■□□□□ 0.193e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-206ENST00000424350 597 ntTSL 315.15■□□□□ 0.023e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.93□□□□□ -0.023e-9■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD54-208ENST00000458278 623 ntTSL 314.77□□□□□ -0.043e-9■■□□□ 13.9
PRPF8Q6P2Q9 CSAD-212ENST00000472908 543 ntTSL 413.61□□□□□ -0.233e-7■■□□□ 13.9
PRPF8Q6P2Q9 CSAD-217ENST00000490923 861 ntTSL 312.55□□□□□ -0.43e-7■■□□□ 13.9
PRPF8Q6P2Q9 CSAD-215ENST00000485004 751 ntTSL 310.72□□□□□ -0.693e-7■■□□□ 13.9
PRPF8Q6P2Q9 FAM193B-219ENST00000524677 1916 ntTSL 213.8□□□□□ -0.24e-8■■□□□ 13.9
PRPF8Q6P2Q9 RNF10-223ENST00000545419 1336 ntTSL 56.6□□□□□ -1.353e-6■■□□□ 13.9
PRPF8Q6P2Q9 GABBR1-217ENST00000489839 407 ntTSL 39.64□□□□□ -0.872e-7■■□□□ 13.9
PRPF8Q6P2Q9 TPCN1-210ENST00000547955 609 ntTSL 59.19□□□□□ -0.941e-6■■□□□ 13.9
PRPF8Q6P2Q9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.429e-8■■□□□ 13.9
PRPF8Q6P2Q9 FBXO2-206ENST00000642025 2215 nt15.83■□□□□ 0.129e-8■■□□□ 13.9
PRPF8Q6P2Q9 ELL2-208ENST00000635633 467 ntTSL 36.25□□□□□ -1.413e-17■■□□□ 13.9
PRPF8Q6P2Q9 EPS8L2-213ENST00000529346 1718 ntTSL 218.13■□□□□ 0.496e-15■■□□□ 13.9
PRPF8Q6P2Q9 AC015813.1-201ENST00000582096 2483 nt5.47□□□□□ -1.539e-14■■□□□ 13.9
PRPF8Q6P2Q9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.29□□□□□ -1.729e-14■■□□□ 13.9
PRPF8Q6P2Q9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.85□□□□□ -1.799e-14■■□□□ 13.9
PRPF8Q6P2Q9 FBRSL1-208ENST00000543453 205 ntTSL 37.78□□□□□ -1.162e-7■■□□□ 13.9
PRPF8Q6P2Q9 ASL-206ENST00000464970 640 ntTSL 313.23□□□□□ -0.292e-9■■□□□ 13.9
PRPF8Q6P2Q9 MED16-212ENST00000607471 2004 ntTSL 1 (best)11.62□□□□□ -0.552e-7■■□□□ 13.9
PRPF8Q6P2Q9 MYO1C-214ENST00000574308 403 ntTSL 37.12□□□□□ -1.271e-8■■□□□ 13.9
PRPF8Q6P2Q9 DYNLL1-206ENST00000549649 794 ntTSL 315.06■□□□□ 04e-6■■□□□ 13.9
PRPF8Q6P2Q9 TRAF7-202ENST00000564067 874 ntTSL 316■□□□□ 0.159e-7■■□□□ 13.9
PRPF8Q6P2Q9 CDK18-221ENST00000512922 1134 ntTSL 214.69□□□□□ -0.067e-7■■□□□ 13.9
PRPF8Q6P2Q9 LMF2-205ENST00000507607 605 ntTSL 216.25■□□□□ 0.191e-6■■□□□ 13.9
PRPF8Q6P2Q9 LMF2-204ENST00000505981 824 ntTSL 515.02■□□□□ -01e-6■■□□□ 13.9
PRPF8Q6P2Q9 TBX3-204ENST00000552054 1814 ntTSL 211.8□□□□□ -0.521e-6■■□□□ 13.9
PRPF8Q6P2Q9 CCND1-202ENST00000535993 568 ntTSL 210.59□□□□□ -0.711e-14■■□□□ 13.9
PRPF8Q6P2Q9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.52■□□□□ 0.083e-7■■□□□ 13.9
PRPF8Q6P2Q9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.015e-7■■□□□ 13.9
PRPF8Q6P2Q9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.265e-7■■□□□ 13.9
PRPF8Q6P2Q9 AATK-208ENST00000573469 754 ntTSL 515.42■□□□□ 0.061e-6■■□□□ 13.9
PRPF8Q6P2Q9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.011e-6■■□□□ 13.9
PRPF8Q6P2Q9 AATK-205ENST00000572339 679 ntTSL 414.4□□□□□ -0.111e-6■■□□□ 13.9
Retrieved 100 of 73,762 protein–RNA pairs in 1791.8 ms