RNA–Protein interactions for RNA: ENST00000545419.5

RNF10-223, Transcript of ring finger protein 10, humanhuman

TSL 5

Gene RNF10, Length 1,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF10-223ENST00000545419 AEBP2Q6ZN18 517 aaPredicted RBP22.23■■□□□ 1.15
RNF10-223ENST00000545419 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
RNF10-223ENST00000545419 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.69
RNF10-223ENST00000545419 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
RNF10-223ENST00000545419 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
RNF10-223ENST00000545419 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
RNF10-223ENST00000545419 FOXD1Q16676 465 aa17.48■□□□□ 0.39
RNF10-223ENST00000545419 ADRA2BP18089 450 aa17.01■□□□□ 0.31
RNF10-223ENST00000545419 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
RNF10-223ENST00000545419 CCDC180Q9P1Z9 1646 aa16.84■□□□□ 0.29
RNF10-223ENST00000545419 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
RNF10-223ENST00000545419 ABCC9O60706 1549 aa16.57■□□□□ 0.24
RNF10-223ENST00000545419 MSH5O43196 834 aa16.13■□□□□ 0.17
RNF10-223ENST00000545419 DCAF8L2P0C7V8 631 aa16.01■□□□□ 0.15
RNF10-223ENST00000545419 NACADO15069 1562 aa15.93■□□□□ 0.14
RNF10-223ENST00000545419 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
RNF10-223ENST00000545419 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
RNF10-223ENST00000545419 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
RNF10-223ENST00000545419 ZCCHC6Q5VYS8 1495 aaKnown RBP15.79■□□□□ 0.12
RNF10-223ENST00000545419 KCNA4P22459 653 aa15.78■□□□□ 0.12
RNF10-223ENST00000545419 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
RNF10-223ENST00000545419 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
RNF10-223ENST00000545419 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
RNF10-223ENST00000545419 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
RNF10-223ENST00000545419 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
RNF10-223ENST00000545419 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
RNF10-223ENST00000545419 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
RNF10-223ENST00000545419 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
RNF10-223ENST00000545419 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
RNF10-223ENST00000545419 SCRIBQ14160 1630 aa15.33■□□□□ 0.05
RNF10-223ENST00000545419 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
RNF10-223ENST00000545419 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
RNF10-223ENST00000545419 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
RNF10-223ENST00000545419 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
RNF10-223ENST00000545419 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
RNF10-223ENST00000545419 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
RNF10-223ENST00000545419 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
RNF10-223ENST00000545419 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
RNF10-223ENST00000545419 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
RNF10-223ENST00000545419 CECR2Q9BXF3 1484 aa14.92□□□□□ -0.02
RNF10-223ENST00000545419 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
RNF10-223ENST00000545419 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
RNF10-223ENST00000545419 BAZ1AQ9NRL2 1556 aaPredicted RBP14.72□□□□□ -0.05
RNF10-223ENST00000545419 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
RNF10-223ENST00000545419 SMARCA4P51532 1647 aa14.71□□□□□ -0.06
RNF10-223ENST00000545419 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
RNF10-223ENST00000545419 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
RNF10-223ENST00000545419 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
RNF10-223ENST00000545419 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
RNF10-223ENST00000545419 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
RNF10-223ENST00000545419 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
RNF10-223ENST00000545419 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
RNF10-223ENST00000545419 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
RNF10-223ENST00000545419 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
RNF10-223ENST00000545419 ZBTB22O15209 634 aa14.46□□□□□ -0.09
RNF10-223ENST00000545419 WIZO95785 1651 aa14.44□□□□□ -0.1
RNF10-223ENST00000545419 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
RNF10-223ENST00000545419 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
RNF10-223ENST00000545419 NESP48681 1621 aa14.34□□□□□ -0.11
RNF10-223ENST00000545419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.129e-7■□□□□ 10.4
RNF10-223ENST00000545419 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
RNF10-223ENST00000545419 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
RNF10-223ENST00000545419 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.12
RNF10-223ENST00000545419 ERCC6Q03468 1493 aa14.27□□□□□ -0.12
RNF10-223ENST00000545419 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.14
RNF10-223ENST00000545419 CFTRP13569 1480 aa14.21□□□□□ -0.14
RNF10-223ENST00000545419 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
RNF10-223ENST00000545419 CUX2O14529 1486 aa14.17□□□□□ -0.14
RNF10-223ENST00000545419 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
RNF10-223ENST00000545419 SUPT5HO00267 1087 aaKnown RBP14.15□□□□□ -0.15
RNF10-223ENST00000545419 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
RNF10-223ENST00000545419 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
RNF10-223ENST00000545419 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
RNF10-223ENST00000545419 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
RNF10-223ENST00000545419 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
RNF10-223ENST00000545419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
RNF10-223ENST00000545419 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
RNF10-223ENST00000545419 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
RNF10-223ENST00000545419 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
RNF10-223ENST00000545419 WDR62O43379 1518 aa13.98□□□□□ -0.17
RNF10-223ENST00000545419 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
RNF10-223ENST00000545419 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
RNF10-223ENST00000545419 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
RNF10-223ENST00000545419 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
RNF10-223ENST00000545419 APLP2Q06481 763 aa13.88□□□□□ -0.19
RNF10-223ENST00000545419 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
RNF10-223ENST00000545419 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
RNF10-223ENST00000545419 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
RNF10-223ENST00000545419 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
RNF10-223ENST00000545419 SOGA1O94964 1423 aa13.76□□□□□ -0.21
RNF10-223ENST00000545419 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
RNF10-223ENST00000545419 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
RNF10-223ENST00000545419 CUX1P39880 1505 aa13.73□□□□□ -0.21
RNF10-223ENST00000545419 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
RNF10-223ENST00000545419 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
RNF10-223ENST00000545419 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
RNF10-223ENST00000545419 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
RNF10-223ENST00000545419 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
RNF10-223ENST00000545419 AQRO60306 1485 aaKnown RBP eCLIP13.68□□□□□ -0.221e-7■■■□□ 16.7
RNF10-223ENST00000545419 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms