Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FAM21FP-204ENST00000608637 956 ntBASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NPIPA1Q9UND3 KRT17P1-201ENST00000399211 1546 ntBASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 AC093827.2-201ENST00000512654 315 ntBASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NPIPA1Q9UND3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 CYP2T3P-201ENST00000601990 817 ntBASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPA1Q9UND3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPA1Q9UND3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms