Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH22Q9UJ99 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 AL023875.1-201ENST00000640777 796 ntBASIC21.65■■□□□ 1.06
CDH22Q9UJ99 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDH22Q9UJ99 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH22Q9UJ99 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH22Q9UJ99 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.64■■□□□ 1.06
CDH22Q9UJ99 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDH22Q9UJ99 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 RPS2P55-201ENST00000397318 883 ntBASIC21.64■■□□□ 1.05
CDH22Q9UJ99 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 AC107956.1-201ENST00000494359 873 ntBASIC21.64■■□□□ 1.05
CDH22Q9UJ99 AC233702.5-201ENST00000584107 538 ntBASIC21.64■■□□□ 1.05
CDH22Q9UJ99 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CDH22Q9UJ99 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 AC105020.6-201ENST00000621523 1217 ntBASIC21.63■■□□□ 1.05
CDH22Q9UJ99 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH22Q9UJ99 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 MTDHP1-201ENST00000605323 784 ntBASIC21.62■■□□□ 1.05
CDH22Q9UJ99 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH22Q9UJ99 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.61■■□□□ 1.05
CDH22Q9UJ99 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.61■■□□□ 1.05
CDH22Q9UJ99 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 AC124016.1-201ENST00000609552 612 ntBASIC21.61■■□□□ 1.05
CDH22Q9UJ99 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH22Q9UJ99 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.6■■□□□ 1.05
CDH22Q9UJ99 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CDH22Q9UJ99 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms