Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.17■□□□□ 0.82
MKS1Q9NXB0 AL158211.5-201ENST00000623583 2518 ntBASIC20.17■□□□□ 0.82
MKS1Q9NXB0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MKS1Q9NXB0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.16■□□□□ 0.82
MKS1Q9NXB0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MKS1Q9NXB0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MKS1Q9NXB0 AC106739.1-201ENST00000617035 715 ntBASIC20.16■□□□□ 0.82
MKS1Q9NXB0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MKS1Q9NXB0 KRT8P36-201ENST00000489121 1440 ntBASIC20.16■□□□□ 0.82
MKS1Q9NXB0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MKS1Q9NXB0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 AC010141.2-201ENST00000452426 721 ntBASIC20.15■□□□□ 0.82
MKS1Q9NXB0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 AC091305.1-201ENST00000479476 895 ntBASIC20.15■□□□□ 0.82
MKS1Q9NXB0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 AC079140.4-201ENST00000507448 529 ntBASIC20.15■□□□□ 0.82
MKS1Q9NXB0 AC120498.10-201ENST00000621827 505 ntBASIC20.15■□□□□ 0.82
MKS1Q9NXB0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MKS1Q9NXB0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
MKS1Q9NXB0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
MKS1Q9NXB0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MKS1Q9NXB0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MKS1Q9NXB0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 BX119927.1-201ENST00000636596 1552 ntBASIC20.13■□□□□ 0.81
MKS1Q9NXB0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 AL355001.2-201ENST00000620617 1191 ntBASIC20.13■□□□□ 0.81
MKS1Q9NXB0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MKS1Q9NXB0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.12■□□□□ 0.81
MKS1Q9NXB0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 PBX2P1-201ENST00000493219 1291 ntBASIC20.12■□□□□ 0.81
MKS1Q9NXB0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms