Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 AL162727.3-201ENST00000635661 2787 ntBASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 AC068418.2-201ENST00000577309 3703 ntBASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CDC42SE1Q9NRR8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE1Q9NRR8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE1Q9NRR8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms