Protein–RNA interactions for Protein: Q9NQ75

CASS4, Cas scaffolding protein family member 4, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4Q9NQ75 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 AC007322.3-201ENST00000426526 701 ntBASIC20.7■□□□□ 0.9
CASS4Q9NQ75 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 AL512408.1-201ENST00000569378 2000 ntBASIC20.7■□□□□ 0.9
CASS4Q9NQ75 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CASS4Q9NQ75 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.69■□□□□ 0.9
CASS4Q9NQ75 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 IKBKGP1-201ENST00000612193 1073 ntBASIC20.69■□□□□ 0.9
CASS4Q9NQ75 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 AC092720.2-201ENST00000602388 1665 ntBASIC20.69■□□□□ 0.9
CASS4Q9NQ75 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.69■□□□□ 0.9
CASS4Q9NQ75 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CASS4Q9NQ75 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 AL137784.2-201ENST00000607332 1000 ntBASIC20.67■□□□□ 0.9
CASS4Q9NQ75 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CASS4Q9NQ75 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASS4Q9NQ75 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms