Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 AL390719.1-204ENST00000412397 1219 ntBASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRPM3Q9HCF6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 KRT16P5-201ENST00000455284 522 ntBASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC27.77■■■□□ 2.04
TRPM3Q9HCF6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
TRPM3Q9HCF6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TRPM3Q9HCF6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.76■■■□□ 2.03
TRPM3Q9HCF6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TRPM3Q9HCF6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
TRPM3Q9HCF6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TRPM3Q9HCF6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TRPM3Q9HCF6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TRPM3Q9HCF6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 SAPCD2P4-201ENST00000424595 1171 ntBASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 AC124283.5-201ENST00000624661 1809 ntBASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 AL353807.1-201ENST00000427475 662 ntBASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
TRPM3Q9HCF6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 AC145285.6-201ENST00000604632 637 ntBASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 REXO1L10P-201ENST00000615707 1290 ntBASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TRPM3Q9HCF6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TRPM3Q9HCF6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC27.73■■■□□ 2.03
TRPM3Q9HCF6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC27.73■■■□□ 2.03
TRPM3Q9HCF6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC27.73■■■□□ 2.03
TRPM3Q9HCF6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
TRPM3Q9HCF6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.73■■■□□ 2.03
TRPM3Q9HCF6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
TRPM3Q9HCF6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 RBM17P1-201ENST00000453646 1190 ntBASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 AC092865.7-201ENST00000641832 219 ntBASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.72■■■□□ 2.03
TRPM3Q9HCF6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 AC079598.2-202ENST00000546624 1451 ntBASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC27.71■■■□□ 2.03
TRPM3Q9HCF6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 AL121906.2-201ENST00000621597 723 ntBASIC27.7■■■□□ 2.03
TRPM3Q9HCF6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
TRPM3Q9HCF6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
TRPM3Q9HCF6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms