Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 AL136379.1-201ENST00000623471 2642 ntBASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC11.96□□□□□ -0.5
CYSTM1Q9H1C7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 FLJ38576-201ENST00000623820 2459 ntBASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 AC080080.1-201ENST00000625121 2420 ntBASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.95□□□□□ -0.5
CYSTM1Q9H1C7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.94□□□□□ -0.5
CYSTM1Q9H1C7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CYSTM1Q9H1C7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms