Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP2Q99959 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.18■□□□□ 0.66
PKP2Q99959 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PKP2Q99959 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP2Q99959 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PKP2Q99959 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PKP2Q99959 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP2Q99959 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
PKP2Q99959 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP2Q99959 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
PKP2Q99959 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PKP2Q99959 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP2Q99959 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
PKP2Q99959 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PKP2Q99959 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PKP2Q99959 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
PKP2Q99959 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP2Q99959 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP2Q99959 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
PKP2Q99959 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PKP2Q99959 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PKP2Q99959 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PKP2Q99959 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.17■□□□□ 0.66
PKP2Q99959 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.17■□□□□ 0.66
PKP2Q99959 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PKP2Q99959 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP2Q99959 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP2Q99959 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP2Q99959 AC093484.2-201ENST00000580996 2166 ntBASIC19.16■□□□□ 0.66
PKP2Q99959 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP2Q99959 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP2Q99959 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.16■□□□□ 0.66
PKP2Q99959 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP2Q99959 AC093503.3-201ENST00000624917 2352 ntBASIC19.16■□□□□ 0.66
PKP2Q99959 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PKP2Q99959 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP2Q99959 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PKP2Q99959 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP2Q99959 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.15■□□□□ 0.66
PKP2Q99959 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.15■□□□□ 0.66
PKP2Q99959 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.15■□□□□ 0.66
PKP2Q99959 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP2Q99959 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.15■□□□□ 0.66
PKP2Q99959 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP2Q99959 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP2Q99959 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.14■□□□□ 0.66
PKP2Q99959 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PKP2Q99959 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PKP2Q99959 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.14■□□□□ 0.66
PKP2Q99959 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PKP2Q99959 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP2Q99959 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP2Q99959 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP2Q99959 UNC93B8-201ENST00000511903 705 ntBASIC19.14■□□□□ 0.65
PKP2Q99959 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP2Q99959 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP2Q99959 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PKP2Q99959 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP2Q99959 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP2Q99959 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PKP2Q99959 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP2Q99959 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP2Q99959 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP2Q99959 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PKP2Q99959 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.14■□□□□ 0.65
PKP2Q99959 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms