Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 FAM201B-201ENST00000458407 597 ntBASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP1Q96SZ6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 KRT8P36-201ENST00000489121 1440 ntBASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 AC026310.3-201ENST00000625186 2373 ntBASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP1Q96SZ6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDK5RAP1Q96SZ6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDK5RAP1Q96SZ6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDK5RAP1Q96SZ6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 ABHD17AP1-201ENST00000358206 933 ntBASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP1Q96SZ6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 TSPY20P-201ENST00000450910 630 ntBASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 UNC93B5-201ENST00000530315 699 ntBASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDK5RAP1Q96SZ6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 POU5F1P3-201ENST00000428824 1078 ntBASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 PNMA6B-201ENST00000538162 1200 ntBASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 MIR4651-201ENST00000582622 73 ntBASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 AC092368.3-202ENST00000574180 1591 ntBASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.18■□□□□ 0.98
CDK5RAP1Q96SZ6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK5RAP1Q96SZ6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms