Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 PRKY-204ENST00000533551 1019 ntBASIC20.06■□□□□ 0.8
PCDH15Q96QU1 AL353708.3-201ENST00000610272 989 ntBASIC20.06■□□□□ 0.8
PCDH15Q96QU1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH15Q96QU1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH15Q96QU1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 PGM5P4-201ENST00000421970 445 ntBASIC20.04■□□□□ 0.8
PCDH15Q96QU1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH15Q96QU1 AC006557.6-201ENST00000623071 864 ntBASIC20.04■□□□□ 0.8
PCDH15Q96QU1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH15Q96QU1 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.03■□□□□ 0.8
PCDH15Q96QU1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH15Q96QU1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH15Q96QU1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH15Q96QU1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH15Q96QU1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH15Q96QU1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH15Q96QU1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PCDH15Q96QU1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCDH15Q96QU1 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH15Q96QU1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDH15Q96QU1 CD177P1-201ENST00000606252 935 ntBASIC20.01■□□□□ 0.79
PCDH15Q96QU1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms