Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.97■□□□□ 0.47
AP3S1Q92572 AC011484.1-201ENST00000377652 1995 ntBASIC17.97■□□□□ 0.47
AP3S1Q92572 AC120498.9-201ENST00000339021 3867 ntBASIC17.97■□□□□ 0.47
AP3S1Q92572 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.97■□□□□ 0.47
AP3S1Q92572 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP3S1Q92572 AC005332.7-201ENST00000614046 2005 ntBASIC17.96■□□□□ 0.47
AP3S1Q92572 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3S1Q92572 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 AC103724.3-201ENST00000564481 992 ntBASIC17.96■□□□□ 0.47
AP3S1Q92572 MTDHP2-201ENST00000601468 714 ntBASIC17.96■□□□□ 0.47
AP3S1Q92572 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
AP3S1Q92572 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S1Q92572 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3S1Q92572 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 YBX1P4-201ENST00000392794 808 ntBASIC17.95■□□□□ 0.46
AP3S1Q92572 ATP5G2P3-201ENST00000429083 425 ntBASIC17.95■□□□□ 0.46
AP3S1Q92572 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3S1Q92572 AL117332.1-201ENST00000622628 974 ntBASIC17.95■□□□□ 0.46
AP3S1Q92572 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
AP3S1Q92572 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3S1Q92572 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
AP3S1Q92572 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S1Q92572 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP3S1Q92572 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3S1Q92572 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3S1Q92572 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP3S1Q92572 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.94■□□□□ 0.46
AP3S1Q92572 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
AP3S1Q92572 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP3S1Q92572 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
AP3S1Q92572 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.94■□□□□ 0.46
AP3S1Q92572 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S1Q92572 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3S1Q92572 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP3S1Q92572 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP3S1Q92572 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3S1Q92572 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP3S1Q92572 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3S1Q92572 AC004987.1-201ENST00000428627 508 ntBASIC17.93■□□□□ 0.46
AP3S1Q92572 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3S1Q92572 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.93■□□□□ 0.46
AP3S1Q92572 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
AP3S1Q92572 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
AP3S1Q92572 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S1Q92572 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
AP3S1Q92572 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3S1Q92572 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
AP3S1Q92572 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S1Q92572 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms