Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 LINC01023-201ENST00000606054 436 ntBASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.93■■□□□ 1.9
RAPGEF4Q8WZA2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
RAPGEF4Q8WZA2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RAPGEF4Q8WZA2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 FAM210CP-201ENST00000445714 574 ntBASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 AC233723.2-201ENST00000623798 2106 ntBASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.9■■□□□ 1.9
RAPGEF4Q8WZA2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 MIR4785-201ENST00000585005 73 ntBASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 AC113410.3-201ENST00000623366 203 ntBASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.89■■□□□ 1.9
RAPGEF4Q8WZA2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
RAPGEF4Q8WZA2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.89■■□□□ 1.89
RAPGEF4Q8WZA2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.89■■□□□ 1.89
RAPGEF4Q8WZA2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 RARRES2P10-201ENST00000564312 460 ntBASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF4Q8WZA2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
RAPGEF4Q8WZA2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 PRKY-204ENST00000533551 1019 ntBASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms