Protein–RNA interactions for Protein: Q6PF15

KLHL35, Kelch-like protein 35, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL35Q6PF15 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL35Q6PF15 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL35Q6PF15 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 AC073210.2-201ENST00000430369 194 ntBASIC20.07■□□□□ 0.8
KLHL35Q6PF15 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 LINC01521-201ENST00000504184 1943 ntBASIC20.07■□□□□ 0.8
KLHL35Q6PF15 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KLHL35Q6PF15 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 AL138781.1-201ENST00000566567 1274 ntBASIC20.06■□□□□ 0.8
KLHL35Q6PF15 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL35Q6PF15 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.05■□□□□ 0.8
KLHL35Q6PF15 AC069152.1-201ENST00000438030 544 ntBASIC20.05■□□□□ 0.8
KLHL35Q6PF15 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL35Q6PF15 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 MIPEPP3-201ENST00000412105 444 ntBASIC20.04■□□□□ 0.8
KLHL35Q6PF15 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 AC007322.3-201ENST00000426526 701 ntBASIC20.04■□□□□ 0.8
KLHL35Q6PF15 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 AC093787.1-201ENST00000450396 207 ntBASIC20.04■□□□□ 0.8
KLHL35Q6PF15 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 AC100791.3-201ENST00000617619 330 ntBASIC20.04■□□□□ 0.8
KLHL35Q6PF15 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL35Q6PF15 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 AC010980.2-201ENST00000587099 1412 ntBASIC20.03■□□□□ 0.8
KLHL35Q6PF15 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL35Q6PF15 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms