Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TCF3P1-201ENST00000423021 1937 ntBASIC15.18■□□□□ 0.02
LINC01559Q495D7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 AC233992.3-201ENST00000607491 485 ntBASIC15.17■□□□□ 0.02
LINC01559Q495D7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.17■□□□□ 0.02
LINC01559Q495D7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01559Q495D7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 SMG8-203ENST00000578922 2178 ntBASIC15.16■□□□□ 0.02
LINC01559Q495D7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC01559Q495D7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01559Q495D7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 AC138932.1-201ENST00000534164 6830 ntBASIC15.15■□□□□ 0.02
LINC01559Q495D7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 EEF1DP3-203ENST00000566025 782 ntBASIC15.15■□□□□ 0.02
LINC01559Q495D7 AC126544.1-201ENST00000580842 1059 ntBASIC15.15■□□□□ 0.02
LINC01559Q495D7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 AC053503.5-201ENST00000601508 636 ntBASIC15.15■□□□□ 0.02
LINC01559Q495D7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC01559Q495D7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms