Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.39■□□□□ 0.69
SKP1P63208 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SKP1P63208 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SKP1P63208 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.39■□□□□ 0.69
SKP1P63208 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SKP1P63208 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SKP1P63208 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.38■□□□□ 0.69
SKP1P63208 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SKP1P63208 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SKP1P63208 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.38■□□□□ 0.69
SKP1P63208 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.38■□□□□ 0.69
SKP1P63208 HLA-L-209ENST00000420110 1011 ntBASIC19.38■□□□□ 0.69
SKP1P63208 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SKP1P63208 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SKP1P63208 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.38■□□□□ 0.69
SKP1P63208 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.38■□□□□ 0.69
SKP1P63208 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.38■□□□□ 0.69
SKP1P63208 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SKP1P63208 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SKP1P63208 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.38■□□□□ 0.69
SKP1P63208 AC006128.1-201ENST00000624704 1661 ntBASIC19.38■□□□□ 0.69
SKP1P63208 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SKP1P63208 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SKP1P63208 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SKP1P63208 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SKP1P63208 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.37■□□□□ 0.69
SKP1P63208 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SKP1P63208 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SKP1P63208 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SKP1P63208 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SKP1P63208 BX276092.2-201ENST00000417668 665 ntBASIC19.37■□□□□ 0.69
SKP1P63208 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.37■□□□□ 0.69
SKP1P63208 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.37■□□□□ 0.69
SKP1P63208 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SKP1P63208 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.37■□□□□ 0.69
SKP1P63208 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SKP1P63208 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SKP1P63208 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SKP1P63208 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SKP1P63208 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.37■□□□□ 0.69
SKP1P63208 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SKP1P63208 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SKP1P63208 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.36■□□□□ 0.69
SKP1P63208 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SKP1P63208 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.36■□□□□ 0.69
SKP1P63208 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.36■□□□□ 0.69
SKP1P63208 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.36■□□□□ 0.69
SKP1P63208 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.36■□□□□ 0.69
SKP1P63208 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.36■□□□□ 0.69
SKP1P63208 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.36■□□□□ 0.69
SKP1P63208 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.36■□□□□ 0.69
SKP1P63208 AC092118.2-201ENST00000613495 667 ntBASIC19.36■□□□□ 0.69
SKP1P63208 AL356652.1-201ENST00000615962 565 ntBASIC19.36■□□□□ 0.69
SKP1P63208 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.36■□□□□ 0.69
SKP1P63208 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SKP1P63208 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.35■□□□□ 0.69
SKP1P63208 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SKP1P63208 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 MIPEPP3-201ENST00000412105 444 ntBASIC19.35■□□□□ 0.69
SKP1P63208 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.35■□□□□ 0.69
SKP1P63208 AC105020.6-201ENST00000621523 1217 ntBASIC19.35■□□□□ 0.69
SKP1P63208 MIR2861-201ENST00000636310 90 ntBASIC19.35■□□□□ 0.69
SKP1P63208 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SKP1P63208 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.35■□□□□ 0.69
SKP1P63208 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.35■□□□□ 0.69
SKP1P63208 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SKP1P63208 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SKP1P63208 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SKP1P63208 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms