Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN20P56880 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN20P56880 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN20P56880 ID1-201ENST00000376105 1233 ntBASIC18.68■□□□□ 0.58
CLDN20P56880 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 HLA-L-209ENST00000420110 1011 ntBASIC18.68■□□□□ 0.58
CLDN20P56880 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN20P56880 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN20P56880 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN20P56880 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN20P56880 AL591742.1-201ENST00000604433 565 ntBASIC18.68■□□□□ 0.58
CLDN20P56880 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN20P56880 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN20P56880 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN20P56880 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN20P56880 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLDN20P56880 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN20P56880 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN20P56880 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN20P56880 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN20P56880 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN20P56880 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN20P56880 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLDN20P56880 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN20P56880 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN20P56880 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN20P56880 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.66■□□□□ 0.58
CLDN20P56880 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLDN20P56880 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN20P56880 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLDN20P56880 AC083906.2-201ENST00000511578 360 ntBASIC18.66■□□□□ 0.58
CLDN20P56880 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN20P56880 AC016405.3-201ENST00000607710 860 ntBASIC18.66■□□□□ 0.58
CLDN20P56880 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN20P56880 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN20P56880 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLDN20P56880 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN20P56880 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN20P56880 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN20P56880 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 GPX1P1-201ENST00000388829 606 ntBASIC18.65■□□□□ 0.58
CLDN20P56880 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN20P56880 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN20P56880 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.65■□□□□ 0.58
CLDN20P56880 AL121832.2-201ENST00000610979 668 ntBASIC18.65■□□□□ 0.58
CLDN20P56880 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN20P56880 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN20P56880 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN20P56880 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN20P56880 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN20P56880 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN20P56880 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.64■□□□□ 0.58
CLDN20P56880 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CLDN20P56880 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.64■□□□□ 0.58
CLDN20P56880 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN20P56880 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN20P56880 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN20P56880 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN20P56880 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN20P56880 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN20P56880 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN20P56880 AC133552.2-202ENST00000575694 574 ntBASIC18.64■□□□□ 0.57
CLDN20P56880 AC104771.1-201ENST00000603335 964 ntBASIC18.64■□□□□ 0.57
CLDN20P56880 AL109923.1-201ENST00000618799 583 ntBASIC18.64■□□□□ 0.57
CLDN20P56880 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN20P56880 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN20P56880 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN20P56880 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
CLDN20P56880 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN20P56880 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN20P56880 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms