Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
KRT6CP48668 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6CP48668 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6CP48668 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.75■□□□□ 0.75
KRT6CP48668 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.75■□□□□ 0.75
KRT6CP48668 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6CP48668 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6CP48668 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6CP48668 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6CP48668 RBM17P2-201ENST00000616397 1405 ntBASIC19.75■□□□□ 0.75
KRT6CP48668 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6CP48668 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
KRT6CP48668 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT6CP48668 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT6CP48668 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT6CP48668 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT6CP48668 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.74■□□□□ 0.75
KRT6CP48668 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.74■□□□□ 0.75
KRT6CP48668 MIR2861-201ENST00000636310 90 ntBASIC19.74■□□□□ 0.75
KRT6CP48668 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT6CP48668 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT6CP48668 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT6CP48668 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT6CP48668 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT6CP48668 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT6CP48668 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KRT6CP48668 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KRT6CP48668 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT6CP48668 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT6CP48668 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KRT6CP48668 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
KRT6CP48668 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT6CP48668 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT6CP48668 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT6CP48668 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
KRT6CP48668 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT6CP48668 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
KRT6CP48668 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT6CP48668 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 AC091799.1-201ENST00000422823 811 ntBASIC19.72■□□□□ 0.75
KRT6CP48668 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT6CP48668 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT6CP48668 AC019069.1-201ENST00000610008 1333 ntBASIC19.72■□□□□ 0.75
KRT6CP48668 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms