Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.21■□□□□ 0.99
MMP13P45452 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.21■□□□□ 0.99
MMP13P45452 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP13P45452 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP13P45452 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP13P45452 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
MMP13P45452 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP13P45452 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP13P45452 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP13P45452 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.2■□□□□ 0.98
MMP13P45452 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.2■□□□□ 0.98
MMP13P45452 AC006015.1-201ENST00000429970 570 ntBASIC21.2■□□□□ 0.98
MMP13P45452 AC245052.3-201ENST00000450182 901 ntBASIC21.2■□□□□ 0.98
MMP13P45452 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.2■□□□□ 0.98
MMP13P45452 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MMP13P45452 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.2■□□□□ 0.98
MMP13P45452 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.2■□□□□ 0.98
MMP13P45452 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP13P45452 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP13P45452 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
MMP13P45452 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP13P45452 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP13P45452 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MMP13P45452 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 AC027702.1-201ENST00000563810 1770 ntBASIC21.19■□□□□ 0.98
MMP13P45452 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP13P45452 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
MMP13P45452 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MMP13P45452 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.19■□□□□ 0.98
MMP13P45452 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.19■□□□□ 0.98
MMP13P45452 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP13P45452 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP13P45452 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP13P45452 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.18■□□□□ 0.98
MMP13P45452 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
MMP13P45452 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MMP13P45452 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MMP13P45452 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MMP13P45452 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.18■□□□□ 0.98
MMP13P45452 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.18■□□□□ 0.98
MMP13P45452 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.18■□□□□ 0.98
MMP13P45452 RARRES2P11-201ENST00000635158 484 ntBASIC21.18■□□□□ 0.98
MMP13P45452 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
MMP13P45452 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP13P45452 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP13P45452 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP13P45452 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP13P45452 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP13P45452 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.17■□□□□ 0.98
MMP13P45452 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MMP13P45452 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.17■□□□□ 0.98
MMP13P45452 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP13P45452 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MMP13P45452 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MMP13P45452 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP13P45452 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP13P45452 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP13P45452 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP13P45452 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP13P45452 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP13P45452 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.16■□□□□ 0.98
MMP13P45452 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP13P45452 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MMP13P45452 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP13P45452 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MMP13P45452 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP13P45452 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP13P45452 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP13P45452 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP13P45452 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MMP13P45452 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.16■□□□□ 0.98
MMP13P45452 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
MMP13P45452 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP13P45452 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
MMP13P45452 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MMP13P45452 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP13P45452 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP13P45452 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MMP13P45452 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms