Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 RAV1YJR033C 4074 nt2.38□□□□□ -2.03
NDE1P40215 ARP8YOR141C 2646 nt2.38□□□□□ -2.03
NDE1P40215 NAB6YML117W 3405 nt2.38□□□□□ -2.03
NDE1P40215 IPT1YDR072C 1584 nt2.37□□□□□ -2.03
NDE1P40215 NOP10YHR072W-A 177 nt2.37□□□□□ -2.03
NDE1P40215 YOR055WYOR055W 435 nt2.37□□□□□ -2.03
NDE1P40215 RUD3YOR216C 1455 nt2.37□□□□□ -2.03
NDE1P40215 BNA7YDR428C 786 nt2.36□□□□□ -2.03
NDE1P40215 SMD1YGR074W 441 nt2.36□□□□□ -2.03
NDE1P40215 VOA1YGR106C 798 nt2.36□□□□□ -2.03
NDE1P40215 YJR140W-AYJR140W-A 150 nt2.36□□□□□ -2.03
NDE1P40215 SVS1YPL163C 783 nt2.36□□□□□ -2.03
NDE1P40215 CDC60YPL160W 3273 nt2.36□□□□□ -2.03
NDE1P40215 YDR210W-AYDR210W-A 1317 nt2.36□□□□□ -2.03
NDE1P40215 CSF1YLR087C 8877 nt2.36□□□□□ -2.03
NDE1P40215 VPS41YDR080W 2979 nt2.36□□□□□ -2.03
NDE1P40215 YBL005W-BYBL005W-B 5268 nt2.36□□□□□ -2.03
NDE1P40215 SPF1YEL031W 3648 nt2.35□□□□□ -2.03
NDE1P40215 SSD1YDR293C 3753 nt2.35□□□□□ -2.03
NDE1P40215 VPS8YAL002W 3825 nt2.35□□□□□ -2.03
NDE1P40215 RPS7BYNL096C 573 nt2.35□□□□□ -2.03
NDE1P40215 ARF3YOR094W 552 nt2.35□□□□□ -2.03
NDE1P40215 YBR071WYBR071W 636 nt2.35□□□□□ -2.03
NDE1P40215 RPB5YBR154C 648 nt2.35□□□□□ -2.03
NDE1P40215 RGA1YOR127W 3024 nt2.35□□□□□ -2.03
NDE1P40215 YDR220CYDR220C 294 nt2.34□□□□□ -2.03
NDE1P40215 YJL127C-BYJL127C-B 159 nt2.34□□□□□ -2.03
NDE1P40215 STE18YJR086W 333 nt2.34□□□□□ -2.03
NDE1P40215 TIM8YJR135W-A 264 nt2.34□□□□□ -2.03
NDE1P40215 YKL044WYKL044W 321 nt2.34□□□□□ -2.03
NDE1P40215 JID1YPR061C 906 nt2.34□□□□□ -2.03
NDE1P40215 BFA1YJR053W 1725 nt2.34□□□□□ -2.04
NDE1P40215 YDR286CYDR286C 345 nt2.33□□□□□ -2.04
NDE1P40215 YEL018C-AYEL018C-A 534 nt2.33□□□□□ -2.04
NDE1P40215 YHR180W-AYHR180W-A 183 nt2.33□□□□□ -2.04
NDE1P40215 AYR1YIL124W 894 nt2.33□□□□□ -2.04
NDE1P40215 YIL156W-BYIL156W-B 222 nt2.33□□□□□ -2.04
NDE1P40215 RCN2YOR220W 798 nt2.33□□□□□ -2.04
NDE1P40215 DGK1YOR311C 873 nt2.33□□□□□ -2.04
NDE1P40215 COS111YBR203W 2775 nt2.33□□□□□ -2.04
NDE1P40215 RIC1YLR039C 3171 nt2.33□□□□□ -2.04
NDE1P40215 NUP82YJL061W 2142 nt2.33□□□□□ -2.04
NDE1P40215 YDR194W-AYDR194W-A 153 nt2.32□□□□□ -2.04
NDE1P40215 PRM8YGL053W 714 nt2.32□□□□□ -2.04
NDE1P40215 CIC1YHR052W 1131 nt2.32□□□□□ -2.04
NDE1P40215 GIC1YHR061C 945 nt2.32□□□□□ -2.04
NDE1P40215 YKL165C-AYKL165C-A 234 nt2.32□□□□□ -2.04
NDE1P40215 GIP3YPL137C 3831 nt2.32□□□□□ -2.04
NDE1P40215 BUD2YKL092C 3315 nt2.32□□□□□ -2.04
NDE1P40215 YJL016WYJL016W 1686 nt2.31□□□□□ -2.04
NDE1P40215 YDR250CYDR250C 276 nt2.31□□□□□ -2.04
NDE1P40215 TMN3YER113C 2121 nt2.31□□□□□ -2.04
NDE1P40215 YKL111CYKL111C 336 nt2.31□□□□□ -2.04
NDE1P40215 UBX4YMR067C 1251 nt2.31□□□□□ -2.04
NDE1P40215 SAS2YMR127C 1017 nt2.31□□□□□ -2.04
NDE1P40215 YBR012W-AYBR012W-A 1323 nt2.31□□□□□ -2.04
NDE1P40215 YOR142W-AYOR142W-A 1323 nt2.31□□□□□ -2.04
NDE1P40215 YPR158W-AYPR158W-A 1323 nt2.31□□□□□ -2.04
NDE1P40215 SMC6YLR383W 3345 nt2.3□□□□□ -2.04
NDE1P40215 PAU14YIL176C 363 nt2.3□□□□□ -2.04
NDE1P40215 PAU1YJL223C 363 nt2.3□□□□□ -2.04
NDE1P40215 EAF6YJR082C 342 nt2.3□□□□□ -2.04
NDE1P40215 YLR031WYLR031W 561 nt2.3□□□□□ -2.04
NDE1P40215 SEN15YMR059W 387 nt2.3□□□□□ -2.04
NDE1P40215 PEX17YNL214W 600 nt2.3□□□□□ -2.04
NDE1P40215 SVL3YPL032C 2478 nt2.3□□□□□ -2.04
NDE1P40215 VTC3YPL019C 2508 nt2.3□□□□□ -2.04
NDE1P40215 SCD5YOR329C 2619 nt2.3□□□□□ -2.04
NDE1P40215 MSB1YOR188W 3414 nt2.29□□□□□ -2.04
NDE1P40215 YCR064CYCR064C 411 nt2.29□□□□□ -2.04
NDE1P40215 RPI1YIL119C 1224 nt2.29□□□□□ -2.04
NDE1P40215 BUD19YJL188C 309 nt2.29□□□□□ -2.04
NDE1P40215 BET3YKR068C 582 nt2.29□□□□□ -2.04
NDE1P40215 YKR075W-AYKR075W-A 270 nt2.29□□□□□ -2.04
NDE1P40215 YLR053CYLR053C 327 nt2.29□□□□□ -2.04
NDE1P40215 SNC2YOR327C 348 nt2.29□□□□□ -2.04
NDE1P40215 ATP15YPL271W 189 nt2.29□□□□□ -2.04
NDE1P40215 SLM6YBR266C 453 nt2.29□□□□□ -2.04
NDE1P40215 IRA2YOL081W 9240 nt2.29□□□□□ -2.04
NDE1P40215 STE11YLR362W 2154 nt2.29□□□□□ -2.04
NDE1P40215 HER1YOR227W 3741 nt2.28□□□□□ -2.04
NDE1P40215 NUP170YBL079W 4509 nt2.28□□□□□ -2.04
NDE1P40215 NUP120YKL057C 3114 nt2.28□□□□□ -2.04
NDE1P40215 YOL098CYOL098C 3114 nt2.28□□□□□ -2.04
NDE1P40215 ATG9YDL149W 2994 nt2.28□□□□□ -2.04
NDE1P40215 PEX4YGR133W 552 nt2.28□□□□□ -2.04
NDE1P40215 tT(UGU)Q1tT(UGU)Q1 76 nt2.28□□□□□ -2.04
NDE1P40215 NCE101YJL205C 162 nt2.28□□□□□ -2.04
NDE1P40215 TEN1YLR010C 483 nt2.28□□□□□ -2.04
NDE1P40215 SPO22YIL073C 2928 nt2.28□□□□□ -2.04
NDE1P40215 CAT2YML042W 2013 nt2.28□□□□□ -2.04
NDE1P40215 VPS13YLL040C 9435 nt2.28□□□□□ -2.04
NDE1P40215 TOF1YNL273W 3717 nt2.28□□□□□ -2.05
NDE1P40215 VPS35YJL154C 2835 nt2.27□□□□□ -2.05
NDE1P40215 TDA9YML081W 3756 nt2.27□□□□□ -2.05
NDE1P40215 YHR214C-CYHR214C-C 1437 nt2.27□□□□□ -2.05
NDE1P40215 SNX41YDR425W 1878 nt2.27□□□□□ -2.05
NDE1P40215 APQ13YJL075C 417 nt2.27□□□□□ -2.05
NDE1P40215 YLR154W-EYLR154W-E 204 nt2.27□□□□□ -2.05
NDE1P40215 MGM1YOR211C 2646 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 47.5 ms