Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTX3P26022 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.57■□□□□ 0.72
PTX3P26022 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTX3P26022 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTX3P26022 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.57■□□□□ 0.72
PTX3P26022 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTX3P26022 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
PTX3P26022 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTX3P26022 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTX3P26022 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTX3P26022 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTX3P26022 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.56■□□□□ 0.72
PTX3P26022 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 MIR935-201ENST00000401179 91 ntBASIC19.56■□□□□ 0.72
PTX3P26022 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.56■□□□□ 0.72
PTX3P26022 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.56■□□□□ 0.72
PTX3P26022 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.56■□□□□ 0.72
PTX3P26022 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.56■□□□□ 0.72
PTX3P26022 AC022517.1-201ENST00000592429 346 ntBASIC19.56■□□□□ 0.72
PTX3P26022 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 FAM21FP-204ENST00000608637 956 ntBASIC19.56■□□□□ 0.72
PTX3P26022 AC011767.1-201ENST00000617410 1153 ntBASIC19.56■□□□□ 0.72
PTX3P26022 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
PTX3P26022 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.56■□□□□ 0.72
PTX3P26022 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTX3P26022 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTX3P26022 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTX3P26022 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.56■□□□□ 0.72
PTX3P26022 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 AC020907.5-201ENST00000624372 1936 ntBASIC19.55■□□□□ 0.72
PTX3P26022 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.55■□□□□ 0.72
PTX3P26022 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.55■□□□□ 0.72
PTX3P26022 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.55■□□□□ 0.72
PTX3P26022 DUX4L16-201ENST00000555130 1264 ntBASIC19.55■□□□□ 0.72
PTX3P26022 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.55■□□□□ 0.72
PTX3P26022 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.55■□□□□ 0.72
PTX3P26022 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.55■□□□□ 0.72
PTX3P26022 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.55■□□□□ 0.72
PTX3P26022 BID-214ENST00000617586 542 ntTSL 5 BASIC19.55■□□□□ 0.72
PTX3P26022 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PTX3P26022 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PTX3P26022 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.55■□□□□ 0.72
PTX3P26022 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTX3P26022 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTX3P26022 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PTX3P26022 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.54■□□□□ 0.72
PTX3P26022 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.54■□□□□ 0.72
PTX3P26022 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTX3P26022 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTX3P26022 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.54■□□□□ 0.72
PTX3P26022 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTX3P26022 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTX3P26022 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.54■□□□□ 0.72
PTX3P26022 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.54■□□□□ 0.72
PTX3P26022 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTX3P26022 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
PTX3P26022 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.54■□□□□ 0.72
PTX3P26022 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTX3P26022 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTX3P26022 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
PTX3P26022 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTX3P26022 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.53■□□□□ 0.72
PTX3P26022 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTX3P26022 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTX3P26022 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.53■□□□□ 0.72
PTX3P26022 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PTX3P26022 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.53■□□□□ 0.72
PTX3P26022 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTX3P26022 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTX3P26022 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.53■□□□□ 0.72
PTX3P26022 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.53■□□□□ 0.72
PTX3P26022 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTX3P26022 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.53■□□□□ 0.72
PTX3P26022 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTX3P26022 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTX3P26022 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.53■□□□□ 0.72
PTX3P26022 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.53■□□□□ 0.72
PTX3P26022 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PTX3P26022 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.52■□□□□ 0.72
PTX3P26022 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.52■□□□□ 0.72
PTX3P26022 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.52■□□□□ 0.72
PTX3P26022 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms