Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FREM3P0C091 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FREM3P0C091 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
FREM3P0C091 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.57■□□□□ 0.56
FREM3P0C091 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.57■□□□□ 0.56
FREM3P0C091 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
FREM3P0C091 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.56■□□□□ 0.56
FREM3P0C091 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.56■□□□□ 0.56
FREM3P0C091 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.56■□□□□ 0.56
FREM3P0C091 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
FREM3P0C091 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.56■□□□□ 0.56
FREM3P0C091 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
FREM3P0C091 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.56■□□□□ 0.56
FREM3P0C091 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.56■□□□□ 0.56
FREM3P0C091 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FREM3P0C091 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.56■□□□□ 0.56
FREM3P0C091 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.56■□□□□ 0.56
FREM3P0C091 AC105020.6-201ENST00000621523 1217 ntBASIC18.56■□□□□ 0.56
FREM3P0C091 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.56■□□□□ 0.56
FREM3P0C091 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM3P0C091 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
FREM3P0C091 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.55■□□□□ 0.56
FREM3P0C091 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.55■□□□□ 0.56
FREM3P0C091 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FREM3P0C091 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
FREM3P0C091 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
FREM3P0C091 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
FREM3P0C091 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
FREM3P0C091 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
FREM3P0C091 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM3P0C091 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
FREM3P0C091 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.54■□□□□ 0.56
FREM3P0C091 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM3P0C091 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
FREM3P0C091 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FREM3P0C091 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM3P0C091 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM3P0C091 AC092118.2-201ENST00000613495 667 ntBASIC18.54■□□□□ 0.56
FREM3P0C091 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM3P0C091 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.54■□□□□ 0.56
FREM3P0C091 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FREM3P0C091 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.54■□□□□ 0.56
FREM3P0C091 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
FREM3P0C091 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM3P0C091 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
FREM3P0C091 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
FREM3P0C091 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.53■□□□□ 0.56
FREM3P0C091 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.53■□□□□ 0.56
FREM3P0C091 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM3P0C091 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM3P0C091 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms