Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC092720.2-201ENST00000602388 1665 ntBASIC17.64■□□□□ 0.42
HLA-DQB1P01920 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQB1P01920 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 BX005040.4-201ENST00000637145 1518 ntBASIC17.63■□□□□ 0.41
HLA-DQB1P01920 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DQB1P01920 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 SRD5A1P1-201ENST00000442297 786 ntBASIC17.62■□□□□ 0.41
HLA-DQB1P01920 AP005435.1-201ENST00000529293 1178 ntBASIC17.62■□□□□ 0.41
HLA-DQB1P01920 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.62■□□□□ 0.41
HLA-DQB1P01920 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 AC011484.1-201ENST00000377652 1995 ntBASIC17.62■□□□□ 0.41
HLA-DQB1P01920 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQB1P01920 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.61■□□□□ 0.41
HLA-DQB1P01920 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 Z82202.1-201ENST00000623446 1880 ntBASIC17.61■□□□□ 0.41
HLA-DQB1P01920 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQB1P01920 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 AL035685.1-201ENST00000636663 812 ntBASIC17.6■□□□□ 0.41
HLA-DQB1P01920 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 AL138781.2-201ENST00000617896 1843 ntBASIC17.6■□□□□ 0.41
HLA-DQB1P01920 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms