Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.16■□□□□ 0.5
CDRT1O95170 DUX4L19-201ENST00000557448 1267 ntBASIC18.16■□□□□ 0.5
CDRT1O95170 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.16■□□□□ 0.5
CDRT1O95170 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.16■□□□□ 0.5
CDRT1O95170 AL138724.1-201ENST00000606771 1088 ntBASIC18.16■□□□□ 0.5
CDRT1O95170 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDRT1O95170 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDRT1O95170 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDRT1O95170 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.15■□□□□ 0.5
CDRT1O95170 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CDRT1O95170 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDRT1O95170 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.15■□□□□ 0.5
CDRT1O95170 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.15■□□□□ 0.5
CDRT1O95170 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.15■□□□□ 0.5
CDRT1O95170 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CDRT1O95170 AC136469.2-201ENST00000623944 1028 ntBASIC18.15■□□□□ 0.5
CDRT1O95170 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 AC125437.2-201ENST00000625180 2167 ntBASIC18.15■□□□□ 0.5
CDRT1O95170 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.15■□□□□ 0.5
CDRT1O95170 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDRT1O95170 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.14■□□□□ 0.5
CDRT1O95170 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDRT1O95170 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDRT1O95170 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDRT1O95170 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDRT1O95170 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDRT1O95170 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDRT1O95170 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDRT1O95170 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDRT1O95170 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CDRT1O95170 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDRT1O95170 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.14■□□□□ 0.49
CDRT1O95170 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.13■□□□□ 0.49
CDRT1O95170 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDRT1O95170 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CDRT1O95170 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CDRT1O95170 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 AP005435.1-201ENST00000529293 1178 ntBASIC18.13■□□□□ 0.49
CDRT1O95170 AC011298.3-201ENST00000615796 283 ntBASIC18.13■□□□□ 0.49
CDRT1O95170 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDRT1O95170 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.13■□□□□ 0.49
CDRT1O95170 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDRT1O95170 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.13■□□□□ 0.49
CDRT1O95170 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.13■□□□□ 0.49
CDRT1O95170 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDRT1O95170 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
CDRT1O95170 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.12■□□□□ 0.49
CDRT1O95170 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.12■□□□□ 0.49
CDRT1O95170 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.12■□□□□ 0.49
CDRT1O95170 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDRT1O95170 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.12■□□□□ 0.49
CDRT1O95170 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.12■□□□□ 0.49
CDRT1O95170 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.12■□□□□ 0.49
CDRT1O95170 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDRT1O95170 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDRT1O95170 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms