Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AL358852.1-201ENST00000623174 1268 ntBASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 MIR2861-201ENST00000636310 90 ntBASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV4-1A0A0J9YWV2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC010141.2-201ENST00000452426 721 ntBASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC116050.2-201ENST00000612102 1779 ntBASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRBV4-1A0A0J9YWV2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms