Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ZNRF2P3-201ENST00000424200 374 ntBASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AL121603.2-201ENST00000557373 2117 ntBASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-8A0A0A6YYG3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 RBM17P2-201ENST00000616397 1405 ntBASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 MIR2861-201ENST00000636310 90 ntBASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AL512408.1-201ENST00000569378 2000 ntBASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-8A0A0A6YYG3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 AL162377.1-201ENST00000618844 1793 ntBASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-8A0A0A6YYG3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms