Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AC100791.3-201ENST00000617619 330 ntBASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 FP700111.2-201ENST00000619190 1892 ntBASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CYP21A1P-202ENST00000354927 1481 ntBASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AL512625.2-201ENST00000417533 625 ntBASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MCRIP2P1-201ENST00000394346 511 ntBASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PGM5P4-201ENST00000421970 445 ntBASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms