Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB9Q9Y5E1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB9Q9Y5E1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.77■■□□□ 1.88
PCDHB9Q9Y5E1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB9Q9Y5E1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
PCDHB9Q9Y5E1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHB9Q9Y5E1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHB9Q9Y5E1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
PCDHB9Q9Y5E1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHB9Q9Y5E1 DUX4L29-201ENST00000425409 679 ntBASIC26.75■■□□□ 1.87
PCDHB9Q9Y5E1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.74■■□□□ 1.87
PCDHB9Q9Y5E1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB9Q9Y5E1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB9Q9Y5E1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB9Q9Y5E1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.74■■□□□ 1.87
PCDHB9Q9Y5E1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB9Q9Y5E1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHB9Q9Y5E1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB9Q9Y5E1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHB9Q9Y5E1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB9Q9Y5E1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDHB9Q9Y5E1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB9Q9Y5E1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
PCDHB9Q9Y5E1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB9Q9Y5E1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB9Q9Y5E1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.65■■□□□ 1.86
PCDHB9Q9Y5E1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB9Q9Y5E1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
PCDHB9Q9Y5E1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDHB9Q9Y5E1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHB9Q9Y5E1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHB9Q9Y5E1 AL135925.1-201ENST00000605920 1701 ntBASIC26.64■■□□□ 1.85
PCDHB9Q9Y5E1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
PCDHB9Q9Y5E1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
PCDHB9Q9Y5E1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHB9Q9Y5E1 MIR4449-201ENST00000578365 66 ntBASIC26.62■■□□□ 1.85
PCDHB9Q9Y5E1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.6■■□□□ 1.85
PCDHB9Q9Y5E1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB9Q9Y5E1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB9Q9Y5E1 AC010864.1-201ENST00000609407 1511 ntBASIC26.59■■□□□ 1.85
PCDHB9Q9Y5E1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB9Q9Y5E1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB9Q9Y5E1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB9Q9Y5E1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB9Q9Y5E1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.58■■□□□ 1.84
PCDHB9Q9Y5E1 MIR639-201ENST00000384974 98 ntBASIC26.57■■□□□ 1.84
PCDHB9Q9Y5E1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.55■■□□□ 1.84
PCDHB9Q9Y5E1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDHB9Q9Y5E1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHB9Q9Y5E1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
PCDHB9Q9Y5E1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB9Q9Y5E1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHB9Q9Y5E1 AC108673.1-201ENST00000510422 1159 ntBASIC26.52■■□□□ 1.84
PCDHB9Q9Y5E1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHB9Q9Y5E1 ST7-AS1-201ENST00000456775 1889 ntBASIC26.51■■□□□ 1.83
PCDHB9Q9Y5E1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHB9Q9Y5E1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
PCDHB9Q9Y5E1 AC021231.2-201ENST00000594613 730 ntBASIC26.51■■□□□ 1.83
PCDHB9Q9Y5E1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.51■■□□□ 1.83
PCDHB9Q9Y5E1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHB9Q9Y5E1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHB9Q9Y5E1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDHB9Q9Y5E1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHB9Q9Y5E1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHB9Q9Y5E1 MIR6090-201ENST00000622481 60 ntBASIC26.49■■□□□ 1.83
PCDHB9Q9Y5E1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDHB9Q9Y5E1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHB9Q9Y5E1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHB9Q9Y5E1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDHB9Q9Y5E1 ABCB10P1-201ENST00000614297 2181 ntBASIC26.46■■□□□ 1.83
PCDHB9Q9Y5E1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.46■■□□□ 1.83
PCDHB9Q9Y5E1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHB9Q9Y5E1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHB9Q9Y5E1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.45■■□□□ 1.82
PCDHB9Q9Y5E1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHB9Q9Y5E1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB9Q9Y5E1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB9Q9Y5E1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB9Q9Y5E1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB9Q9Y5E1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.43■■□□□ 1.82
PCDHB9Q9Y5E1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB9Q9Y5E1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB9Q9Y5E1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB9Q9Y5E1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB9Q9Y5E1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.42■■□□□ 1.82
PCDHB9Q9Y5E1 AC016575.1-201ENST00000607026 382 ntBASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms