Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MIR762-201ENST00000390236 83 ntBASIC27.3■■□□□ 1.96
PCDH18Q9HCL0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDH18Q9HCL0 AC139426.1-201ENST00000568218 2529 ntBASIC27.29■■□□□ 1.96
PCDH18Q9HCL0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDH18Q9HCL0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDH18Q9HCL0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDH18Q9HCL0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDH18Q9HCL0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
PCDH18Q9HCL0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDH18Q9HCL0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDH18Q9HCL0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDH18Q9HCL0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
PCDH18Q9HCL0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
PCDH18Q9HCL0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDH18Q9HCL0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.25■■□□□ 1.95
PCDH18Q9HCL0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDH18Q9HCL0 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.24■■□□□ 1.95
PCDH18Q9HCL0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDH18Q9HCL0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDH18Q9HCL0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.23■■□□□ 1.95
PCDH18Q9HCL0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDH18Q9HCL0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDH18Q9HCL0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
PCDH18Q9HCL0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDH18Q9HCL0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDH18Q9HCL0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDH18Q9HCL0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
PCDH18Q9HCL0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH18Q9HCL0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH18Q9HCL0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH18Q9HCL0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH18Q9HCL0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDH18Q9HCL0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDH18Q9HCL0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
PCDH18Q9HCL0 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.2■■□□□ 1.94
PCDH18Q9HCL0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.2■■□□□ 1.94
PCDH18Q9HCL0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDH18Q9HCL0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH18Q9HCL0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH18Q9HCL0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH18Q9HCL0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH18Q9HCL0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
PCDH18Q9HCL0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH18Q9HCL0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH18Q9HCL0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH18Q9HCL0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH18Q9HCL0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH18Q9HCL0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH18Q9HCL0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH18Q9HCL0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PCDH18Q9HCL0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH18Q9HCL0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH18Q9HCL0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH18Q9HCL0 AC005559.1-201ENST00000589661 871 ntBASIC27.13■■□□□ 1.93
PCDH18Q9HCL0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH18Q9HCL0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH18Q9HCL0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH18Q9HCL0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH18Q9HCL0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.11■■□□□ 1.93
PCDH18Q9HCL0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDH18Q9HCL0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.1■■□□□ 1.93
PCDH18Q9HCL0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDH18Q9HCL0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDH18Q9HCL0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDH18Q9HCL0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH18Q9HCL0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
PCDH18Q9HCL0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH18Q9HCL0 AL139393.2-201ENST00000608721 2025 ntBASIC27.09■■□□□ 1.93
PCDH18Q9HCL0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.08■■□□□ 1.93
PCDH18Q9HCL0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDH18Q9HCL0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDH18Q9HCL0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
PCDH18Q9HCL0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDH18Q9HCL0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.07■■□□□ 1.92
PCDH18Q9HCL0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.06■■□□□ 1.92
PCDH18Q9HCL0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDH18Q9HCL0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH18Q9HCL0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH18Q9HCL0 DUX4L28-201ENST00000623687 678 ntBASIC27.05■■□□□ 1.92
PCDH18Q9HCL0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH18Q9HCL0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH18Q9HCL0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH18Q9HCL0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDH18Q9HCL0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.03■■□□□ 1.92
PCDH18Q9HCL0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDH18Q9HCL0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDH18Q9HCL0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDH18Q9HCL0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
PCDH18Q9HCL0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH18Q9HCL0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27■■□□□ 1.91
PCDH18Q9HCL0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27■■□□□ 1.91
PCDH18Q9HCL0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDH18Q9HCL0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27■■□□□ 1.91
PCDH18Q9HCL0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.99■■□□□ 1.91
PCDH18Q9HCL0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH18Q9HCL0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH18Q9HCL0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH18Q9HCL0 AC127502.1-201ENST00000399971 1502 ntBASIC26.98■■□□□ 1.91
PCDH18Q9HCL0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDH18Q9HCL0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms